RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 DHRS7BQ6IAN0 325 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-208ENST00000574755 RBMXL1Q96E39 390 aaKnown RBP11.55□□□□□ -0.56
VPS33B-208ENST00000574755 SMDT1Q9H4I9 107 aa11.55□□□□□ -0.56
VPS33B-208ENST00000574755 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
VPS33B-208ENST00000574755 GRNP28799 593 aaKnown RBP11.55□□□□□ -0.56
VPS33B-208ENST00000574755 AARDQ4LEZ3 155 aa11.55□□□□□ -0.56
VPS33B-208ENST00000574755 KDF1Q8NAX2 398 aaPredicted RBP11.55□□□□□ -0.56
VPS33B-208ENST00000574755 H1FXQ92522 213 aaKnown RBP11.55□□□□□ -0.56
VPS33B-208ENST00000574755 ADTRPQ96IZ2 230 aa11.55□□□□□ -0.56
VPS33B-208ENST00000574755 TMEM147Q9BVK8 224 aa11.55□□□□□ -0.56
VPS33B-208ENST00000574755 ARFGEF3Q5TH69 2177 aa11.55□□□□□ -0.56
VPS33B-208ENST00000574755 PLAUP00749 431 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 ELLP55199 621 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-208ENST00000574755 SPCS3P61009 180 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 SLC25A48Q6ZT89 311 aaKnown RBP11.54□□□□□ -0.56
VPS33B-208ENST00000574755 ZNF383Q8NA42 475 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 ZNF714Q96N38 554 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 CLCC1Q96S66 551 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 TRAV3A0A0B4J244 114 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 B9A039 149 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 NDUFB3O43676 98 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 FCN3O75636 299 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 CCL3L1P16619 93 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 RELBQ01201 579 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 EFNB3Q15768 340 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 FBXL19-AS1Q494R0 122 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 LRRC10Q5BKY1 277 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 SP5Q6BEB4 398 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-208ENST00000574755 LYPD2Q6UXB3 125 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 RHOVQ96L33 236 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 CISD1Q9NZ45 108 aaKnown RBP11.54□□□□□ -0.56
VPS33B-208ENST00000574755 ZNRD1Q9P1U0 126 aa11.54□□□□□ -0.56
VPS33B-208ENST00000574755 TET2Q6N021 2002 aaPredicted RBP11.54□□□□□ -0.56
VPS33B-208ENST00000574755 IGHV1-69-2A0A0G2JMI3 117 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 TMEM41BQ5BJD5 291 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 HEYLQ9NQ87 328 aaPredicted RBP11.53□□□□□ -0.56
VPS33B-208ENST00000574755 ATRXP46100 2492 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 C15orf62A8K5M9 175 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 LY86O95711 162 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 IFNA10P01566 189 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 DAOP14920 347 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 FGF7P21781 194 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 GNB2P62879 340 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 TMEM200BQ69YZ2 307 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 LCN15Q6UWW0 184 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 HEPN1Q6WQI6 88 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 OR10A7Q8NGE5 316 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 OR52E5Q8NH55 327 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
VPS33B-208ENST00000574755 AIFM2Q9BRQ8 373 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 TIMM9Q9Y5J7 89 aa11.53□□□□□ -0.56
VPS33B-208ENST00000574755 TRAV1-1A0A0B4J248 108 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 M0R036 132 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 RPP30P78346 268 aaKnown RBP11.52□□□□□ -0.57
VPS33B-208ENST00000574755 ZNF726P1Q15940 193 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 SOHLH1Q5JUK2 328 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 ZNF787Q6DD87 383 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 OR4A47Q6IF82 309 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 ETV3LQ6ZN32 361 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 ZNF429Q86V71 674 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 CLDND2Q8NHS1 167 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 ZCCHC14Q8WYQ9 949 aaKnown RBP11.52□□□□□ -0.57
VPS33B-208ENST00000574755 DVL1O14640 695 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 SCAF4O95104 1147 aaKnown RBP11.52□□□□□ -0.57
VPS33B-208ENST00000574755 CEBPGP53567 150 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 AWAT1Q58HT5 328 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 SSX7Q7RTT5 188 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 C20orf24Q9BUV8 137 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 RPS10P5Q9NQ39 176 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 GNG13Q9P2W3 67 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 CTSZQ9UBR2 303 aa11.52□□□□□ -0.57
VPS33B-208ENST00000574755 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
VPS33B-208ENST00000574755 C15orf61A6NNL5 157 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 TNFRSF13BO14836 293 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-208ENST00000574755 HRASP01112 189 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 ARG1P05089 322 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 AKR1C3P42330 323 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 HOXA1P49639 335 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-208ENST00000574755 FGF8P55075 233 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-208ENST00000574755 TFF3Q07654 80 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 ICAM4Q14773 271 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 HFEQ30201 348 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 PDLIM3Q53GG5 364 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-208ENST00000574755 ZNF506Q5JVG8 444 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 CENPVQ7Z7K6 275 aaPredicted RBP11.51□□□□□ -0.57
VPS33B-208ENST00000574755 MUC15Q8N387 334 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 RXFP4Q8TDU9 374 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 CA5BP1Q8WTZ4 195 aa11.51□□□□□ -0.57
VPS33B-208ENST00000574755 SNRNP70P08621 437 aaKnown RBP11.5□□□□□ -0.57
VPS33B-208ENST00000574755 CT45A6P0DMU7 189 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 CT45A5P0DMU8 189 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 CT45A7P0DMV0 189 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 ADORA2A-AS1P86434 159 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 RTL8BQ17RB0 113 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 VWC2Q2TAL6 325 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 MBD3L1Q8WWY6 194 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
VPS33B-208ENST00000574755 UNKLQ9H9P5 680 aaKnown RBP11.5□□□□□ -0.57
VPS33B-208ENST00000574755 SLC35D1Q9NTN3 355 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms