RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 TRGC2P03986 189 aa13.73□□□□□ -0.21
CACNA1A-202ENST00000573710 SSBP3Q9BWW4 388 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-202ENST00000573710 ZFPL1O95159 310 aa13.73□□□□□ -0.21
CACNA1A-202ENST00000573710 SHISA5Q8N114 240 aa13.73□□□□□ -0.21
CACNA1A-202ENST00000573710 MTURNQ8N3F0 131 aa13.73□□□□□ -0.21
CACNA1A-202ENST00000573710 CBLN4Q9NTU7 201 aa13.73□□□□□ -0.21
CACNA1A-202ENST00000573710 FUT5Q11128 374 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 ORAOV1Q8WV07 137 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 RASL10BQ96S79 203 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 IGHV5-10-1A0A0J9YXX1 117 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 PPYP01298 95 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 HOXB3P14651 431 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 ZBTB42B2RXF5 422 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 SYNGR3O43761 229 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 UBE2V2Q15819 145 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 CBLN3Q6UW01 205 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 TCF24Q7RTU0 167 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 CYB561D1Q8N8Q1 229 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 WNT2BQ93097 391 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 TRGC1P0CF51 173 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 EWSR1Q01844 656 aaKnown RBP eCLIP13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 DEGS2Q6QHC5 323 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 COL6A6A6NMZ7 2263 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 LRP6O75581 1613 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 TMEM50AO95807 157 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 TNFSF10P50591 281 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 CTAG1AP78358 180 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 MYEOVQ96EZ4 313 aa13.72□□□□□ -0.21
CACNA1A-202ENST00000573710 TMEM250H0YL14 139 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 EVI2AP22794 236 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 PCSK4Q6UW60 755 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 GTSF1LQ9H1H1 148 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 NKG7Q16617 165 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 SMIM4Q8WVI0 70 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 SLC6A13Q9NSD5 602 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 ZNF414Q96IQ9 312 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 QTRT1Q9BXR0 403 aaKnown RBP13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 GP1BAP07359 652 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 RPS11P62280 158 aaKnown RBP eCLIP13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 RUNX1Q01196 453 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 KCNK7Q9Y2U2 307 aa13.71□□□□□ -0.21
CACNA1A-202ENST00000573710 VAX1Q5SQQ9 334 aa13.71□□□□□ -0.22
CACNA1A-202ENST00000573710 TANC2Q9HCD6 1990 aa13.71□□□□□ -0.22
CACNA1A-202ENST00000573710 NCR2O95944 276 aa13.71□□□□□ -0.22
CACNA1A-202ENST00000573710 IGHV3-11P01762 117 aa13.71□□□□□ -0.22
CACNA1A-202ENST00000573710 SSBP1Q04837 148 aaKnown RBP13.71□□□□□ -0.22
CACNA1A-202ENST00000573710 KCNE5Q9UJ90 142 aa13.71□□□□□ -0.22
CACNA1A-202ENST00000573710 KLK2P20151 261 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 FIZ1Q96SL8 496 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 SEPSECSQ9HD40 501 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 SEMA5BQ9P283 1151 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 OR2H1Q9GZK4 316 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 OR5AC2Q9NZP5 309 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 CT62P0C5K7 136 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 ANKRD36A6QL64 1941 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 C7orf77A4D0Y5 90 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 PNKDQ8N490 385 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 MOSP00540 346 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 LOXL4Q96JB6 756 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 TTTY12Q9BZ98 90 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 THADAQ6YHU6 1953 aa13.7□□□□□ -0.22
CACNA1A-202ENST00000573710 NAPSAO96009 420 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 FOXA3P55318 350 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 PSG9Q00887 426 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 OR4X2Q8NGF9 303 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 MRPL24Q96A35 216 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 C17orf51A8MQB3 221 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 FAM74A3Q4VXF1 159 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 CD7P09564 240 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 FGF5P12034 268 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 LRTM2Q8N967 370 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 CDC42EP3Q9UKI2 254 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 TOPAZ1Q8N9V7 1692 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 NDUFB6O95139 128 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 MESTQ5EB52 335 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 ZNF430Q9H8G1 570 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 CALYQ9NYX4 217 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 KBTBD11-OT1A0A1B0GTJ5 212 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 OR11H12B2RN74 326 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 CRYBB2P43320 205 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 MIC13Q5XKP0 118 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 OR11H1Q8NG94 326 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 ADARB2-AS1A8MUL3 147 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 MRGPRGQ86SM5 289 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 NABP2Q9BQ15 211 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 SLC17A5Q9NRA2 495 aa13.69□□□□□ -0.22
CACNA1A-202ENST00000573710 TOMM40O96008 361 aa13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 GALP22466 123 aa13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 ABHD12Q8N2K0 398 aa13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 NPVFQ9HCQ7 196 aa13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 UQCR10Q9UDW1 63 aa13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 TRAV24A0A0B4J272 114 aa13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 UCNP55089 124 aa13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 ACSF3Q4G176 576 aaPredicted RBP13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 YBX2Q9Y2T7 364 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 TGIF2-C20orf24A0A0A6YYL0 155 aa13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 F8WEM9 126 aa13.68□□□□□ -0.22
CACNA1A-202ENST00000573710 CRYBB3P26998 211 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms