RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TMEM86BQ8N661 226 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 KLHDC1Q8N7A1 406 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 YIPF7Q8N8F6 280 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 LRTM2Q8N967 370 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 OR5A1Q8NGJ0 315 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 OR5M9Q8NGP3 310 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 OR5R1Q8NH85 324 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 ZNF519Q8TB69 540 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 ZNF502Q8TBZ5 544 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 PIFOQ8TCI5 191 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 PSMF1Q92530 271 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 DCUN1D4Q92564 292 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 DYRK2Q92630 601 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 DLX4Q92988 240 aaPredicted RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 BORCS7Q96B45 105 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 Q96MF0 132 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 GPR82Q96P67 336 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 SIGLEC12Q96PQ1 595 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 TBX15Q96SF7 602 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 GPX7Q96SL4 187 aaPredicted RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 AMELYQ99218 206 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 EMC6Q9BV81 110 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 SUCNR1Q9BXA5 334 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 TMEM59Q9BXS4 323 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 LINC00470Q9BZP3 86 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 MRPL18Q9H0U6 180 aaKnown RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 MED28Q9H204 178 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 OR10A2Q9H208 303 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 CST9LQ9H4G1 147 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 VSIRQ9H7M9 311 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 PTGES2Q9H7Z7 377 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 SH2D2AQ9NP31 389 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 AURKAIP1Q9NWT8 199 aaPredicted RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 IDI2-AS1Q9NZ38 188 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 ABRACLQ9P1F3 81 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 Q9UF83 564 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 TRAPPC2LQ9UL33 140 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 POLR1DQ9Y2S0 133 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 CSAG2Q9Y5P2 127 aa2.95□□□□□ -1.94
SMG6-208ENST00000570874 CNOT1A5YKK6 2376 aaKnown RBP2.95□□□□□ -1.94
SMG6-208ENST00000570874 CFAP54Q96N23 3096 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 CUL9Q8IWT3 2517 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 URB1O60287 2271 aaKnown RBP2.94□□□□□ -1.94
SMG6-208ENST00000570874 CACNA1HO95180 2353 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 IGLV3-32A0A0A0MS00 114 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 IGHV2-70DA0A0C4DH43 119 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 A0A0J9YW62 118 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 A0A1B0GX51 115 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 TMEM218A2RU14 115 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 C15orf61A6NNL5 157 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 C15orf62A8K5M9 175 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 KRTAP9-7A8MTY7 169 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 J3QLW9 94 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 CCL21O00585 134 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 PDCD5O14737 125 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 ZNHIT1O43257 154 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 OR7C2O60412 319 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 ARL6IP5O75915 188 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 UBL3O95164 117 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 TOMM40O96008 361 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 IGHMP01871 453 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 CT45A6P0DMU7 189 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 CT45A5P0DMU8 189 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 CT45A7P0DMV0 189 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 CTLA4P16410 223 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 ZNF19P17023 458 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 SPINK2P20155 84 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 RAB5AP20339 215 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 COX5AP20674 150 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 APLNRP35414 380 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 GLRXP35754 106 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 B3GALT5-AS1P59052 145 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 NANOS3P60323 173 aaKnown RBP2.94□□□□□ -1.94
SMG6-208ENST00000570874 POU3F1Q03052 451 aaPredicted RBP2.94□□□□□ -1.94
SMG6-208ENST00000570874 RHEBQ15382 184 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 OR8B8Q15620 311 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 SRSF7Q16629 238 aaKnown RBP eCLIP2.94□□□□□ -1.94
SMG6-208ENST00000570874 LRRC37A5PQ49AS3 106 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 SCGB2B2Q4G0G5 96 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 CT45A1Q5HYN5 189 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 NCMAPQ5T1S8 102 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 AVPI1Q5T686 147 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 SPINK14Q6IE38 97 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 OR10K2Q6IF99 312 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 CNIH2Q6PI25 160 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 ARL9Q6T311 187 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 ZNF322Q6U7Q0 402 aaPredicted RBP2.94□□□□□ -1.94
SMG6-208ENST00000570874 C12orf54Q6X4T0 127 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 TMEM91Q6ZNR0 172 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 C8orf86Q6ZUL3 223 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 NR2C2APQ86WQ0 139 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 H1FOOQ8IZA3 346 aaPredicted RBP2.94□□□□□ -1.94
SMG6-208ENST00000570874 LYG1Q8N1E2 194 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 OR10R2Q8NGX6 335 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 CT45A3Q8NHU0 189 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 FGFBP3Q8TAT2 258 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 NEIL3Q8TAT5 605 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 THAP6Q8TBB0 222 aa2.94□□□□□ -1.94
SMG6-208ENST00000570874 ZNF431Q8TF32 576 aaPredicted RBP2.94□□□□□ -1.94
SMG6-208ENST00000570874 MRPL24Q96A35 216 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms