RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 BVESQ8NE79 360 aa8.32□□□□□ -1.08
VPS53-207ENST00000570510 OR52B4Q8NGK2 314 aa8.32□□□□□ -1.08
VPS53-207ENST00000570510 OR1L1Q8NH94 360 aa8.32□□□□□ -1.08
VPS53-207ENST00000570510 YIPF6Q96EC8 236 aa8.32□□□□□ -1.08
VPS53-207ENST00000570510 CABLES2Q9BTV7 478 aa8.32□□□□□ -1.08
VPS53-207ENST00000570510 OR51E2Q9H255 320 aa8.32□□□□□ -1.08
VPS53-207ENST00000570510 AK3Q9UIJ7 227 aa8.32□□□□□ -1.08
VPS53-207ENST00000570510 SPATA2Q9UM82 520 aa8.32□□□□□ -1.08
VPS53-207ENST00000570510 DNAH10Q8IVF4 4471 aa8.32□□□□□ -1.08
VPS53-207ENST00000570510 OR5H14A6NHG9 310 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 SLC22A5O76082 557 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 CA2P00918 260 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 ATF4P18848 351 aaPredicted RBP8.31□□□□□ -1.08
VPS53-207ENST00000570510 OR3A3P47888 321 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 CLDN12P56749 244 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 FXYD3Q14802 87 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 ANKRD55Q3KP44 614 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 HACD4Q5VWC8 232 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 ZNF833PQ6ZTB9 187 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 NR2C2APQ86WQ0 139 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 WDR89Q96FK6 387 aaPredicted RBP8.31□□□□□ -1.08
VPS53-207ENST00000570510 USMG5Q96IX5 58 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 AGMATQ9BSE5 352 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 DIABLOQ9NR28 239 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 COA4Q9NYJ1 87 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 TP53TG1Q9Y2A0 90 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 KCNK7Q9Y2U2 307 aa8.31□□□□□ -1.08
VPS53-207ENST00000570510 MUC4Q99102 2169 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 FABP7O15540 132 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 FCGR3AP08637 254 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 PPP1CCP36873 323 aaKnown RBP8.3□□□□□ -1.08
VPS53-207ENST00000570510 TALDO1P37837 337 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 CBX5P45973 191 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 MECP2P51608 486 aaKnown RBP8.3□□□□□ -1.08
VPS53-207ENST00000570510 RPS16P62249 146 aaKnown RBP8.3□□□□□ -1.08
VPS53-207ENST00000570510 PRR20EP86478 221 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 PRR20CP86479 221 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 PRR20DP86480 221 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 PRR20BP86481 221 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 PRR20AP86496 221 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 DEFB135Q30KP9 77 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 DEFB114Q30KQ6 69 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 ZNF343Q6P1L6 599 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 Q6ZWC4 215 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 WFDC3Q8IUB2 231 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 OR52L2PQ8NGH6 319 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 OR13F1Q8NGS4 319 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 ACOT12Q8WYK0 555 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 BCL7BQ9BQE9 202 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 ATG5Q9H1Y0 275 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 RHBDL2Q9NX52 303 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 TECRQ9NZ01 308 aaKnown RBP8.3□□□□□ -1.08
VPS53-207ENST00000570510 FBXL17Q9UF56 701 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 DAPK2Q9UIK4 370 aa8.3□□□□□ -1.08
VPS53-207ENST00000570510 SAA2-SAA4A0A096LPE2 208 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 TRBV6-7A0A0A0MS04 114 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 LOC100506127A0A0U1RQW1 187 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 TRBV12-3P01733 135 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 SAA2P0DJI9 122 aaPredicted RBP8.29□□□□□ -1.08
VPS53-207ENST00000570510 KIR2DS2P43631 304 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 DEFA5Q01523 94 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 RBMS2Q15434 407 aaKnown RBP8.29□□□□□ -1.08
VPS53-207ENST00000570510 MSMO1Q15800 293 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 CDNFQ49AH0 187 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 ODF3L1Q8IXM7 274 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 OR10J5Q8NHC4 309 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 SLC25A46Q96AG3 418 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 TSNAXQ99598 290 aaKnown RBP8.29□□□□□ -1.08
VPS53-207ENST00000570510 MRPS26Q9BYN8 205 aaKnown RBP8.29□□□□□ -1.08
VPS53-207ENST00000570510 MFFQ9GZY8 342 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 IFI27L2Q9H2X8 130 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 ZNF221Q9UK13 617 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 WASHC3Q9Y3C0 194 aa8.29□□□□□ -1.08
VPS53-207ENST00000570510 PRSS29PA6NIE9 313 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 ST8SIA5O15466 376 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 TUSC2O75896 110 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 FOLR2P14207 255 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 CEACAM6P40199 344 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 TCTAP57738 103 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 ZNF45Q02386 682 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 ARFRP1Q13795 201 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 GNMTQ14749 295 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 PSG5Q15238 335 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 CNIH2Q6PI25 160 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 GLDNQ6ZMI3 551 aaPredicted RBP8.28□□□□□ -1.08
VPS53-207ENST00000570510 STPG3Q8N7X2 389 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 OR5AN1Q8NGI8 311 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 C2CD4CQ8TF44 421 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 IL1F10Q8WWZ1 152 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 AP3S1Q92572 193 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 S100A16Q96FQ6 103 aaKnown RBP8.28□□□□□ -1.08
VPS53-207ENST00000570510 ADTRPQ96IZ2 230 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 TMEM68Q96MH6 324 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 PHB2Q99623 299 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 TINAGL1Q9GZM7 467 aaPredicted RBP8.28□□□□□ -1.08
VPS53-207ENST00000570510 KCNK15Q9H427 330 aa8.28□□□□□ -1.08
VPS53-207ENST00000570510 MSGN1A6NI15 193 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 UBE2CO00762 179 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 SPDEFO95238 335 aa8.27□□□□□ -1.09
VPS53-207ENST00000570510 SCTP09683 121 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms