RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 C5orf51A6NDU8 294 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 MARCH11A6NNE9 402 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 SIX6O95475 246 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 TRAPPC2P0DI81 140 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 TRAPPC2BP0DI82 140 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 VDAC1P21796 283 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 CLEC9AQ6UXN8 241 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 C9orf139Q6ZV77 190 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 VKORC1L1Q8N0U8 176 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 BCL6BQ8N143 479 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 LSM10Q969L4 123 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 SEC22AQ96IW7 307 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 MEGF9Q9H1U4 602 aa12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 TEP1Q99973 2627 aaKnown RBP12.38□□□□□ -0.43
HERPUD1-219ENST00000570273 TLN2Q9Y4G6 2542 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 A0A0G2JRQ6 117 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 MOSP00540 346 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 CXCL3P19876 107 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 HNF4GQ14541 408 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 LRRC75BQ2VPJ9 315 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 NMSQ5H8A3 153 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 THOC7Q6I9Y2 204 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 GSG1LQ6UXU4 331 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 H2BFWTQ7Z2G1 175 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 OR2T10Q8NGZ9 312 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 TSNAXQ99598 290 aaKnown RBP12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 SPIN2AQ99865 258 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 SPIN2BQ9BPZ2 258 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 AIFM2Q9BRQ8 373 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 PDCD10Q9BUL8 212 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 TMEM140Q9NV12 185 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 MMP24Q9Y5R2 645 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 FAM90A9PA6NNJ1 464 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 FAM106CPP0CH98 169 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 SAA1P0DJI8 122 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 TMEM11P17152 192 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 HLA-GP17693 338 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 DYNLT3P51808 116 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 POU2AF1Q16633 256 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 IZUMO4Q1ZYL8 232 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 IAH1Q2TAA2 248 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 VMA21Q3ZAQ7 101 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 LURAP1LQ8IV03 231 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 CHAC2Q8WUX2 184 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 GPR146Q96CH1 333 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 EAF1Q96JC9 268 aaPredicted RBP12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 RITA1Q96K30 269 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 RHOVQ96L33 236 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 CHIAQ9BZP6 476 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 TMEM160Q9NX00 188 aa12.37□□□□□ -0.43
HERPUD1-219ENST00000570273 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 MPTX1A8MV57 137 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 LGALS7P47929 136 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 CD83Q01151 205 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 MMDQ15546 238 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 FBLN7Q53RD9 439 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 OR4A47Q6IF82 309 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 AKAP14Q86UN6 197 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 THNSL2Q86YJ6 484 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 OR10C1Q96KK4 312 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 SSX3Q99909 188 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 RNF5Q99942 180 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 CACNG5Q9UF02 275 aa12.36□□□□□ -0.43
HERPUD1-219ENST00000570273 SLC25A17O43808 307 aa12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 IGLV2-23P01705 113 aa12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 P0C879 139 aa12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 CNTFRP26992 372 aa12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 H2BFSP57053 126 aa12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 UBE2KP61086 200 aa12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 EBI3Q14213 229 aa12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 AANATQ16613 207 aa12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 ZBTB8BQ8NAP8 495 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 ZNF436Q9C0F3 470 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 RANBP3Q9H6Z4 567 aaPredicted RBP12.35□□□□□ -0.43
HERPUD1-219ENST00000570273 A0A1B0GU03 582 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 H3BUX3 64 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 RBMXL2O75526 392 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 CCNKO75909 580 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 SPDEFO95238 335 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 OR9G9P0C7N8 305 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 SMCO1Q147U7 214 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 PSG5Q15238 335 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 PUSL1Q8N0Z8 303 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 Q8N6K4 173 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 OR1S1Q8NH92 325 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 VSTM2AQ8TAG5 236 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 C2orf50Q96LR7 162 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 GSKIPQ9P0R6 139 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 KIAA1456Q9P272 454 aa12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 METTL1Q9UBP6 276 aaKnown RBP12.34□□□□□ -0.43
HERPUD1-219ENST00000570273 NBR2O15453 112 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 SNAPC5O75971 98 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 KBTBD11O94819 623 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 OR2A4O95047 310 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 SLC25A6P12236 298 aa12.33□□□□□ -0.44
HERPUD1-219ENST00000570273 OR2B8PP59922 312 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms