RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 BMPR1BO00238 502 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 RAB29O14966 203 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 YPEL1O60688 119 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 FKBP6O75344 327 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 RBBP9O75884 186 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 OR2C1O95371 312 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 MAS1P04201 325 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 IGKV1-16P04430 117 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 APELAP0DMC3 54 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 GTF2F2P13984 249 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 FOLR2P14207 255 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 MC5RP33032 325 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 ZNF93P35789 620 aaPredicted RBP4.15□□□□□ -1.75
CDH13-211ENST00000568770 KIR2DS2P43631 304 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 LGALS7P47929 136 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 HTD2P86397 168 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 PJVKQ0ZLH3 352 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 TMED1Q13445 227 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 DEFB135Q30KP9 77 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 SLC22A6Q4U2R8 563 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 ZNF585BQ52M93 769 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 DMKNQ6E0U4 476 aaPredicted RBP4.15□□□□□ -1.75
CDH13-211ENST00000568770 FAM71F2Q6NXP2 309 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 WDR73Q6P4I2 378 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 LINC00336Q6ZUF6 198 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 SLC16A13Q7RTY0 426 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 OR5AK2Q8NH90 309 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 GHSRQ92847 366 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 USMG5Q96IX5 58 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 TMEM68Q96MH6 324 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 YPEL2Q96QA6 119 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 RNF5Q99942 180 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 RIBC2Q9H4K1 309 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 ISG20L2Q9H9L3 353 aaKnown RBP4.15□□□□□ -1.75
CDH13-211ENST00000568770 SPACA1Q9HBV2 294 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 PAK1IP1Q9NWT1 392 aaPredicted RBP4.15□□□□□ -1.75
CDH13-211ENST00000568770 COA4Q9NYJ1 87 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 KCNIP1Q9NZI2 227 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 PIPOXQ9P0Z9 390 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 ENOPH1Q9UHY7 261 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 TP53TG1Q9Y2A0 90 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 WASHC3Q9Y3C0 194 aa4.15□□□□□ -1.75
CDH13-211ENST00000568770 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 E9PI62 339 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 G3V2T6 193 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 XRCC3O43542 346 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 ZNF780AO75290 641 aaPredicted RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 CA11O75493 328 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 SC5DO75845 299 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 RPSAP08865 295 aaKnown RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 FCGR1AP12314 374 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 HOXB6P17509 224 aaKnown RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 FASP25445 335 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 POLR2IP36954 125 aaKnown RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 APOC4P55056 127 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 RIPK1Q13546 671 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 LY6G6FQ5SQ64 297 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 DDI2Q5TDH0 399 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 GGNBP1Q5YKI7 109 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 KDM4DQ6B0I6 523 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 ZNF554Q86TJ5 538 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 LHFPL3Q86UP9 236 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 SPATA24Q86W54 205 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 AQP12AQ8IXF9 295 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 TMEM61Q8N0U2 210 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 DRAXINQ8NBI3 349 aaPredicted RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 OR52B4Q8NGK2 314 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 OR8J1Q8NGP2 316 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 MRPL30Q8TCC3 161 aaKnown RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 IL1F10Q8WWZ1 152 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 CACNG8Q8WXS5 425 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 GALMQ96C23 342 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 ABHD14BQ96IU4 210 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 NSL1Q96IY1 281 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 TSNAXQ99598 290 aaKnown RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 TMEM138Q9NPI0 162 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 ARGLU1Q9NWB6 273 aaPredicted RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 TECRQ9NZ01 308 aaKnown RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 ZNF230Q9UIE0 474 aaPredicted RBP4.14□□□□□ -1.75
CDH13-211ENST00000568770 GMPPBQ9Y5P6 360 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 PEX16Q9Y5Y5 336 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 HERC1Q15751 4861 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 HSPG2P98160 4391 aa4.14□□□□□ -1.75
CDH13-211ENST00000568770 PPP5D1E7EU14 171 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 DCTN3O75935 186 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 BAG2O95816 211 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 SCGB1D1O95968 90 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 HLA-AP01891 365 aaKnown RBP4.13□□□□□ -1.75
CDH13-211ENST00000568770 PRH1P02810 166 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 CTRB1P17538 263 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 FUT3P21217 361 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 CBLN1P23435 193 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 BDKRB2P30411 391 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 ARL3P36405 182 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 PPP3R1P63098 170 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 ZNF45Q02386 682 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 ATP5G2Q06055 141 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 EXOSC2Q13868 293 aaKnown RBP4.13□□□□□ -1.75
CDH13-211ENST00000568770 GPR176Q14439 515 aa4.13□□□□□ -1.75
CDH13-211ENST00000568770 ANKRD55Q3KP44 614 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms