RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FBXL7Q9UJT9 491 aa8.77□□□□□ -1.01
GTF3C1-209ENST00000568569 PKHD1P08F94 4074 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 KIR2DL5BA0A0G2JN68 375 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 KIR2DL5BA0A0G2JPC4 375 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 EFCAB10A6NFE3 127 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 FOXI3A8MTJ6 420 aaPredicted RBP8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 MYL12BO14950 172 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 BET1O15155 118 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 FABP7O15540 132 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 CD3GP09693 182 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 SAA1P0DJI8 122 aaPredicted RBP8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 WNT4P56705 351 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 ST3GAL4Q11206 333 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 CDK10Q15131 360 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 ACSM3Q53FZ2 586 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 CLEC19AQ6UXS0 136 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 MMD2Q8IY49 270 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 SLC38A6Q8IZM9 456 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 KIR2DL5AQ8N109 375 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 STPG3Q8N7X2 389 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 OR6M1Q8NGM8 313 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 OR10J5Q8NHC4 309 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 KIR2DL5BQ8NHK3 375 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 MARC2Q969Z3 335 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 RNF183Q96D59 192 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 ARHGAP5-AS1Q96IT6 56 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 CABLES2Q9BTV7 478 aa8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 RBM7Q9Y580 266 aaKnown RBP8.76□□□□□ -1.01
GTF3C1-209ENST00000568569 NPIPB5A8MRT5 1133 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 DIRAS3O95661 229 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 IGHV3-23P01764 117 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 DUTP33316 252 aaKnown RBP8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 TMEM50BP56557 158 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 MRPS15P82914 257 aaKnown RBP8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 IGSF11Q5DX21 431 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 MS4A15Q8N5U1 240 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 OR2C3Q8N628 320 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 FBLIM1Q8WUP2 373 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 EEF1AKMT3Q96AZ1 226 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 SPAG8Q99932 426 aaPredicted RBP8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 PECRQ9BY49 303 aa8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 SMPD3Q9NY59 655 aaPredicted RBP8.75□□□□□ -1.01
GTF3C1-209ENST00000568569 TRBV6-7A0A0A0MS04 114 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 DPPA5A6NC42 116 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 HMX3A6NHT5 357 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 LINC00473A8K010 186 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 TEX22C9J3V5 150 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 DHFRP00374 187 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 GSTT2P0CG29 244 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 GSTT2BP0CG30 244 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 C8orf88P0DMB2 117 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 CD37P11049 281 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 HSD17B12Q53GQ0 312 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 MFFQ9GZY8 342 aa8.74□□□□□ -1.01
GTF3C1-209ENST00000568569 GALP22466 123 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 PRR20EP86478 221 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 PRR20CP86479 221 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 PRR20DP86480 221 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 PRR20BP86481 221 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 PRR20AP86496 221 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 P2RY14Q15391 338 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 MED22Q15528 200 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 ZNF585BQ52M93 769 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 PLAC9Q5JTB6 97 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 UNQ9165/PRO28630Q6UXU0 137 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 SETD9Q8NE22 299 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 OR56B1Q8NGI3 324 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 FANCD2OSQ96PS1 177 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 GINS4Q9BRT9 223 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 DCUN1D5Q9BTE7 237 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 C5orf66Q9H5L9 145 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 PLGRKTQ9HBL7 147 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 MRPL27Q9P0M9 148 aaKnown RBP8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 UBQLN2Q9UHD9 624 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 S4R3C0 116 aa8.73□□□□□ -1.01
GTF3C1-209ENST00000568569 DNAH6Q9C0G6 4158 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 TRBV7-1A0A0A6YYK4 115 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 SLC17A2O00624 439 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 FCGR3BO75015 233 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 IFNA4P05014 189 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 CDK1P06493 297 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 CRYGCP07315 174 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 FCGR3AP08637 254 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 MYOD1P15172 320 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 RPL27AP46776 148 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 ELLP55199 621 aaPredicted RBP8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 TCTAP57738 103 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 RBMS2Q15434 407 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 C10orf67Q8IYJ2 551 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 PQLC1Q8N2U9 271 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 VSTM2AQ8TAG5 236 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 CXorf58Q96LI9 332 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 FYTTD1Q96QD9 318 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 OR51E2Q9H255 320 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 SLC2A9Q9NRM0 540 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 MRPS7Q9Y2R9 242 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 UFC1Q9Y3C8 167 aa8.72□□□□□ -1.01
GTF3C1-209ENST00000568569 TSPAN4O14817 238 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms