RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TSKUQ8WUA8 353 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 TSACCQ96A04 125 aaPredicted RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 SLC35E1Q96K37 410 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 IMUPQ9GZP8 106 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 NPFFR1Q9GZQ6 430 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 VSIRQ9H7M9 311 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 EHFQ9NZC4 300 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 MBD3L4A6NDZ8 208 aaPredicted RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 MBD3L3A6NE82 208 aaPredicted RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 NPIPB13A6NJU9 1138 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 IQCF6A8MYZ5 107 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 NPIPB4C9JG80 1138 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 PI3P19957 117 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 CCL7P80098 99 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 CD226Q15762 336 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 PMCHL1Q16048 86 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 PERPQ96FX8 193 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 KIAA0100Q14667 2235 aaKnown RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 GRIFINA4D1Z8 144 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 NTSR1P30989 418 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 RPS27P42677 84 aaKnown RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZNF766Q5HY98 468 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 GLYATL3Q5SZD4 288 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 AMMECR1LQ6DCA0 310 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 CDRT4Q8N9R6 151 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 OR2A1Q8NGT9 310 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 OR52E5Q8NH55 327 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ADAT3Q96EY9 351 aaPredicted RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 RNF5Q99942 180 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 SFXN3Q9BWM7 321 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 RNF186Q9NXI6 227 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 COLQQ9Y215 455 aaPredicted RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 ATP23Q9Y6H3 246 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 PLXND1Q9Y4D7 1925 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 PLXNA4Q9HCM2 1894 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 PPIFP30405 207 aaKnown RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZNF141Q15928 474 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 MORN2Q502X0 79 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 LCNL1Q6ZST4 164 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZNF525Q8N782 197 aa2.5□□□□□ -2.01
CHD9-218ENST00000566029 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.5□□□□□ -2.01
CHD9-218ENST00000566029 TMSB15BA0A087X1C1 80 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 NKX2-6A6NCS4 301 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 F5H5K5 113 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 DPM2O94777 84 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 MPZL1O95297 269 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 MYOD1P15172 320 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 RPL18Q07020 188 aaKnown RBP2.49□□□□□ -2.01
CHD9-218ENST00000566029 PLCXD2Q0VAA5 305 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 C3orf56Q8N813 242 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 PARLQ9H300 379 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 KIF26AQ9ULI4 1882 aaPredicted RBP2.49□□□□□ -2.01
CHD9-218ENST00000566029 COL4A3Q01955 1670 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 LOC101059948A0A1B0GTJ6 334 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 TMEM189A5PLL7 270 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 SMAD7O15105 426 aaKnown RBP2.49□□□□□ -2.01
CHD9-218ENST00000566029 STATHP02808 62 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 ANOS1P23352 680 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 HOXA4Q00056 320 aaPredicted RBP2.49□□□□□ -2.01
CHD9-218ENST00000566029 TRIP6Q15654 476 aaKnown RBP2.49□□□□□ -2.01
CHD9-218ENST00000566029 C2orf82Q6UX34 121 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 LYZL2Q7Z4W2 148 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 OTOSQ8NHW6 89 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 NEUROG1Q92886 237 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 UBE2E2Q96LR5 201 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 SMIM7Q9BQ49 75 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 APOOQ9BUR5 198 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 PLAGL1Q9UM63 463 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 GAGE7O76087 117 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 TCL1BO95988 128 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 GAGE12FP0CL80 117 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 GAGE12GP0CL81 117 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 GAGE12IP0CL82 117 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 EVI2AP22794 236 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 GAGE4Q13068 117 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 OR4S2Q8NH73 311 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 TMEM171Q8WVE6 324 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 ZNF479Q96JC4 524 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 VDAC3Q9Y277 283 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 PRTN3P24158 256 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 OPRM1P35372 400 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 SSBP2P81877 361 aaPredicted RBP2.49□□□□□ -2.01
CHD9-218ENST00000566029 PRDX1Q06830 199 aaKnown RBP2.49□□□□□ -2.01
CHD9-218ENST00000566029 ZNF74Q16587 644 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 ZNF695Q8IW36 515 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 SLC22A24Q8N4F4 322 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 NFAM1Q8NET5 270 aaPredicted RBP2.49□□□□□ -2.01
CHD9-218ENST00000566029 OR4P4Q8NGL7 312 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 CST9LQ9H4G1 147 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 HS3ST2Q9Y278 367 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 ZNF318Q5VUA4 2279 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 SDCBPO00560 298 aaPredicted RBP2.49□□□□□ -2.01
CHD9-218ENST00000566029 ISLRO14498 428 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 C3orf79P0CE67 100 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 SRD5A1P18405 259 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 GABRA3P34903 492 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 GLIPR1L1Q6UWM5 242 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 OR5D14Q8NGL3 314 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 OR10G7Q8NGN6 311 aa2.49□□□□□ -2.01
CHD9-218ENST00000566029 C9orf85Q96MD7 179 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms