RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ARL6IP1Q15041 203 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 PSG5Q15238 335 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 HMGN3Q15651 99 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 RNASE12Q5GAN4 147 aaKnown RBP9.67□□□□□ -0.86
RNF40-208ENST00000565995 C6orf201Q7Z4U5 140 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 SNX29P2Q8IUI4 249 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 ARHGAP5-AS1Q96IT6 56 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 AGMATQ9BSE5 352 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 CHMP1AQ9HD42 196 aaPredicted RBP9.67□□□□□ -0.86
RNF40-208ENST00000565995 RETNQ9HD89 108 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 WASHC3Q9Y3C0 194 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 DNAH10Q8IVF4 4471 aa9.67□□□□□ -0.86
RNF40-208ENST00000565995 UBE2QL1A1L167 161 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 IZUMO1RA6ND01 250 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 TMEM235A6NFC5 223 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 RAB27BO00194 218 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 SPDEFO95238 335 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 GNG2P59768 71 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 PLGLAQ15195 96 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 ZNF343Q6P1L6 599 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 FAM89BQ8N5H3 189 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 POC5Q8NA72 575 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 S100ZQ8WXG8 99 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 TMEM68Q96MH6 324 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 PECRQ9BY49 303 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 METTL1Q9UBP6 276 aaKnown RBP9.66□□□□□ -0.86
RNF40-208ENST00000565995 SLC23A1Q9UHI7 598 aa9.66□□□□□ -0.86
RNF40-208ENST00000565995 RBMY1BA6NDE4 496 aaKnown RBP9.65□□□□□ -0.86
RNF40-208ENST00000565995 RBMY1EA6NEQ0 496 aaKnown RBP9.65□□□□□ -0.86
RNF40-208ENST00000565995 PROP1O75360 226 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 CA2P00918 260 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 GSTP1P09211 210 aaKnown RBP9.65□□□□□ -0.86
RNF40-208ENST00000565995 CD3GP09693 182 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 RBMY1DP0C7P1 496 aaKnown RBP9.65□□□□□ -0.86
RNF40-208ENST00000565995 AADACP22760 399 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 SYNJ2BPP57105 145 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 SSBP2P81877 361 aaPredicted RBP9.65□□□□□ -0.86
RNF40-208ENST00000565995 TATDN3Q17R31 274 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 CDNFQ49AH0 187 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 PYDC2Q56P42 97 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 PLAC9Q5JTB6 97 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 ZNF880Q6PDB4 577 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 LINC00299Q6ZSB3 139 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 CCDC190Q86UF4 302 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 SETD6Q8TBK2 473 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 ABHD5Q8WTS1 349 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 C15orf40Q8WUR7 153 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 CYYR1Q96J86 154 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 FAM110AQ9BQ89 295 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 SULT4A1Q9BR01 284 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 FAAP24Q9BTP7 215 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 WDR12Q9GZL7 423 aaKnown RBP9.65□□□□□ -0.86
RNF40-208ENST00000565995 RABL2AQ9UBK7 228 aaPredicted RBP9.65□□□□□ -0.86
RNF40-208ENST00000565995 PEF1Q9UBV8 284 aaKnown RBP9.65□□□□□ -0.86
RNF40-208ENST00000565995 RABL2BQ9UNT1 228 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 V9GYH0 126 aa9.65□□□□□ -0.86
RNF40-208ENST00000565995 ZNF785A8K8V0 405 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 FOXI3A8MTJ6 420 aaPredicted RBP9.64□□□□□ -0.87
RNF40-208ENST00000565995 MFNGO00587 321 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 ST8SIA5O15466 376 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 SLC25A17O43808 307 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 OR2A4O95047 310 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 PTHLHP12272 177 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 ZNF45Q02386 682 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 ZNF846Q147U1 533 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 FXYD3Q14802 87 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 RPL39P5Q59GN2 51 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 GLDNQ6ZMI3 551 aaPredicted RBP9.64□□□□□ -0.87
RNF40-208ENST00000565995 NUDCD2Q8WVJ2 157 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 USMG5Q96IX5 58 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 CLCC1Q96S66 551 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 TSNAXQ99598 290 aaKnown RBP9.64□□□□□ -0.87
RNF40-208ENST00000565995 CMSS1Q9BQ75 279 aaKnown RBP9.64□□□□□ -0.87
RNF40-208ENST00000565995 TINAGL1Q9GZM7 467 aaPredicted RBP9.64□□□□□ -0.87
RNF40-208ENST00000565995 AUNIPQ9H7T9 357 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 AKIP1Q9NQ31 210 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 C12orf4Q9NQ89 552 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 AK3Q9UIJ7 227 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 HSF4Q9ULV5 492 aa9.64□□□□□ -0.87
RNF40-208ENST00000565995 ANKRD34BA5PLL1 514 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 MEIS3P1A6NDR6 274 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 H7C2Y5 167 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 NAPSAO96009 420 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 PRSS3P35030 304 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 ETV6P41212 452 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 TMEM50BP56557 158 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 HACD4Q5VWC8 232 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 MFSD4AQ8N468 514 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 OR5T1Q8NG75 326 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 NEURL2Q9BR09 285 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 PLEKHA3Q9HB20 300 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 IFT46Q9NQC8 304 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 ZNF355PQ9NSJ1 428 aa9.63□□□□□ -0.87
RNF40-208ENST00000565995 ELF5Q9UKW6 265 aaPredicted RBP9.63□□□□□ -0.87
RNF40-208ENST00000565995 PCLOQ9Y6V0 5065 aa9.62□□□□□ -0.87
RNF40-208ENST00000565995 TPPPO94811 219 aa9.62□□□□□ -0.87
RNF40-208ENST00000565995 CNIH1O95406 144 aa9.62□□□□□ -0.87
RNF40-208ENST00000565995 IGKV1-16P04430 117 aa9.62□□□□□ -0.87
RNF40-208ENST00000565995 CRYGBP07316 175 aa9.62□□□□□ -0.87
RNF40-208ENST00000565995 PTBP1P26599 531 aaKnown RBP eCLIP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms