RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 TSPAN5P62079 268 aa13.53□□□□□ -0.24
USB1-209ENST00000564387 KIAA0141Q14154 515 aaPredicted RBP13.53□□□□□ -0.24
USB1-209ENST00000564387 TCTEX1D1Q8N7M0 179 aa13.53□□□□□ -0.24
USB1-209ENST00000564387 CLCC1Q96S66 551 aa13.53□□□□□ -0.24
USB1-209ENST00000564387 DCUN1D5Q9BTE7 237 aa13.53□□□□□ -0.24
USB1-209ENST00000564387 RSRP1Q9BUV0 290 aa13.53□□□□□ -0.24
USB1-209ENST00000564387 TINAGL1Q9GZM7 467 aaPredicted RBP13.53□□□□□ -0.24
USB1-209ENST00000564387 WSB1Q9Y6I7 421 aa13.53□□□□□ -0.24
USB1-209ENST00000564387 M0QYG6 137 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 TNFSF12O43508 249 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 SOX15O60248 233 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 PGLYRP1O75594 196 aaPredicted RBP13.52□□□□□ -0.25
USB1-209ENST00000564387 SAA1P0DJI8 122 aaPredicted RBP13.52□□□□□ -0.25
USB1-209ENST00000564387 CDX1P47902 265 aaPredicted RBP13.52□□□□□ -0.25
USB1-209ENST00000564387 TAS2R19P59542 299 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 TMEM267Q0VDI3 215 aaPredicted RBP13.52□□□□□ -0.25
USB1-209ENST00000564387 CATR1Q13166 79 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 IL18Q14116 193 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 FXYD3Q14802 87 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 POU2AF1Q16633 256 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 PRSS8Q16651 343 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 RNASE12Q5GAN4 147 aaKnown RBP13.52□□□□□ -0.25
USB1-209ENST00000564387 RNASE10Q5GAN6 216 aaKnown RBP13.52□□□□□ -0.25
USB1-209ENST00000564387 LPCAT3Q6P1A2 487 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 PUSL1Q8N0Z8 303 aaKnown RBP13.52□□□□□ -0.25
USB1-209ENST00000564387 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.25
USB1-209ENST00000564387 TNCP24821 2201 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 FABP12A6NFH5 140 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 GPR31O00270 319 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 RAMP3O60896 148 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 RPLP1P05386 114 aaKnown RBP13.51□□□□□ -0.25
USB1-209ENST00000564387 IL6RP08887 468 aaPredicted RBP13.51□□□□□ -0.25
USB1-209ENST00000564387 OR2B11Q5JQS5 317 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 CXorf66Q5JRM2 361 aaPredicted RBP13.51□□□□□ -0.25
USB1-209ENST00000564387 CMTM1Q8IZ96 169 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 SPAG16Q8N0X2 631 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 WFDC9Q8NEX5 89 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 OR4D10Q8NGI6 311 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 FAM110DQ8TAY7 271 aaPredicted RBP13.51□□□□□ -0.25
USB1-209ENST00000564387 ARPC1AQ92747 370 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 R3HDM4Q96D70 268 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 PLEKHA2Q9HB19 425 aa13.51□□□□□ -0.25
USB1-209ENST00000564387 FAM212BQ9NTI7 297 aaPredicted RBP13.51□□□□□ -0.25
USB1-209ENST00000564387 A0A1W2PRX2 142 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 DPPA5A6NC42 116 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 BRI3O95415 125 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 HPRT1P00492 218 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 HRASP01112 189 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 ZNF735P0CB33 412 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 ETV6P41212 452 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 FOXB2Q5VYV0 432 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 STEAP1BQ6NZ63 245 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 CCDC190Q86UF4 302 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 CADM3Q8N126 398 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 VSTM2AQ8TAG5 236 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 TMEM167AQ8TBQ9 72 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 RHOVQ96L33 236 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 TMEM68Q96MH6 324 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 AIFM2Q9BRQ8 373 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 FAM103A1Q9BTL3 118 aaKnown RBP13.5□□□□□ -0.25
USB1-209ENST00000564387 KLK15Q9H2R5 256 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 FOXA2Q9Y261 457 aaPredicted RBP13.5□□□□□ -0.25
USB1-209ENST00000564387 V9GYH0 126 aa13.5□□□□□ -0.25
USB1-209ENST00000564387 MEGF8Q7Z7M0 2845 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 ANKRD20A5PA0PJZ0 165 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 OR2A4O95047 310 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 RAB3DO95716 219 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 IFNA6P05013 189 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 FGF2P09038 288 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 F2RP25116 425 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 PTBP1P26599 531 aaKnown RBP eCLIP13.49□□□□□ -0.25
USB1-209ENST00000564387 TAS2R31P59538 309 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 ASPHD1Q5U4P2 390 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 ETV3LQ6ZN32 361 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 IDO2Q6ZQW0 420 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 LCNL1Q6ZST4 164 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 C18orf65Q6ZTR6 163 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 ZNF695Q8IW36 515 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 MMD2Q8IY49 270 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 SLC38A6Q8IZM9 456 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 VKORC1L1Q8N0U8 176 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 LFNGQ8NES3 379 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 OR5M8Q8NGP6 311 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 TERB2Q8NHR7 220 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 UBE2E2Q96LR5 201 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 OR2A7Q96R45 310 aa13.49□□□□□ -0.25
USB1-209ENST00000564387 ZNF430Q9H8G1 570 aaPredicted RBP13.49□□□□□ -0.25
USB1-209ENST00000564387 CREBL2O60519 120 aaPredicted RBP13.48□□□□□ -0.25
USB1-209ENST00000564387 KBTBD11O94819 623 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 RLN1P04808 185 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 RAB9AP51151 201 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 RND3P61587 244 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 MEF2DQ14814 521 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 ZNF79Q15937 498 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 ECSCRQ19T08 205 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 ZNF585BQ52M93 769 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 UNQ5815/PRO19632Q6UWF5 114 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 ZNF491Q8N8L2 437 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 OR51H1Q8NH63 302 aa13.48□□□□□ -0.25
USB1-209ENST00000564387 MRGPRFQ96AM1 343 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms