RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 C14orf144Q96I85 54 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 ELOVL1Q9BW60 279 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 WDFY3Q8IZQ1 3526 aa10.87□□□□□ -0.67
USB1-207ENST00000563149 IGHV2OR16-5A0A0B4J2B6 119 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 TRGV8A0A0C4DH27 118 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 DEFB108AA8MXU0 73 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 PRR33A8MZF0 331 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 GALR2O43603 387 aaPredicted RBP10.86□□□□□ -0.67
USB1-207ENST00000563149 PROP1O75360 226 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 STAG3L2P0CL84 134 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 STAG3L3P0CL85 134 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 CCKARP32238 428 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 FABP6P51161 128 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 RPS16P62249 146 aaKnown RBP10.86□□□□□ -0.67
USB1-207ENST00000563149 SPINK9Q5DT21 86 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 KIAA2026Q5HYC2 2103 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 ATP1A1-AS1Q5TC04 95 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 TREML4Q6UXN2 200 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 TMPRSS7Q7RTY8 843 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 TPRX1Q8N7U7 411 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 TMEM18Q96B42 140 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 NOL4LQ96MY1 436 aaPredicted RBP10.86□□□□□ -0.67
USB1-207ENST00000563149 TMEM204Q9BSN7 226 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 HEYLQ9NQ87 328 aaPredicted RBP10.86□□□□□ -0.67
USB1-207ENST00000563149 GNG12Q9UBI6 72 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 MED13Q9UHV7 2174 aa10.86□□□□□ -0.67
USB1-207ENST00000563149 PRSS46E5RG02 174 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 CXorf1O96002 111 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 GZMBP10144 247 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 RELBQ01201 579 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 VWA1Q6PCB0 445 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 IGFL2Q6UWQ7 119 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 TMEM144Q7Z5S9 345 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 C9orf106Q8NAJ2 232 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 S1PR3Q99500 378 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 MSL2Q9HCI7 577 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 NPVFQ9HCQ7 196 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 IGHV1-18A0A0C4DH31 117 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 M0R1X1 148 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 PLA2G5P39877 138 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 RAB7AP51149 207 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 CNN1P51911 297 aaKnown RBP10.85□□□□□ -0.67
USB1-207ENST00000563149 EDDM3BP56851 147 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 P2RY6Q15077 328 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 LBHQ53QV2 105 aaPredicted RBP10.85□□□□□ -0.67
USB1-207ENST00000563149 CST9LP1Q5W188 147 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.85□□□□□ -0.67
USB1-207ENST00000563149 FUT9Q9Y231 359 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 PTPRBP23467 1997 aa10.85□□□□□ -0.67
USB1-207ENST00000563149 A0A087X0M5 115 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 TRAV38-1A0A0B4J264 116 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 A0A1B0GX30 115 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 AHRRA9YTQ3 701 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 GFRA3O60609 400 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 TFF1P04155 84 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 ATP5G3P48201 142 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 LINC00205P59089 165 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 EDDM3AQ14507 147 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 TRIP6Q15654 476 aaKnown RBP10.84□□□□□ -0.67
USB1-207ENST00000563149 ZNF600Q6ZNG1 722 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 TMEM37Q8WXS4 190 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 DCTN5Q9BTE1 182 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 GGTLC1Q9BX51 225 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 PXMP4Q9Y6I8 212 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 WDR87Q6ZQQ6 2873 aa10.84□□□□□ -0.67
USB1-207ENST00000563149 IGKV1D-17A0A075B6S4 117 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 TRAV9-1A0A075B6T8 112 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 TRAV17A0A0B4J275 112 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 MDFIC2A0A1B0GVS7 189 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 FNDC10F2Z333 226 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 NDUFB4O95168 129 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 IL3RAP26951 378 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 CHRNA7P36544 502 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 LOXL3P58215 753 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 RPL15P61313 204 aaKnown RBP10.83□□□□□ -0.68
USB1-207ENST00000563149 FAM78BQ5VT40 261 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 DDB2Q92466 427 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 MGST2Q99735 147 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 MS4A5Q9H3V2 200 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 ZNF71Q9NQZ8 489 aaPredicted RBP10.83□□□□□ -0.68
USB1-207ENST00000563149 FZR1Q9UM11 496 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 PROCRQ9UNN8 238 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 TCF19Q9Y242 345 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 DOCK7Q96N67 2140 aa10.83□□□□□ -0.68
USB1-207ENST00000563149 RRHO14718 337 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 MT-CO2P00403 227 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 CRYAAP02489 173 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 EGR1P18146 543 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 UBE2G2P60604 165 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 SSTP61278 116 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 HOXA4Q00056 320 aaPredicted RBP10.82□□□□□ -0.68
USB1-207ENST00000563149 LTC4SQ16873 150 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 GCSAMLQ5JQS6 135 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 BHLHA15Q7RTS1 189 aaPredicted RBP10.82□□□□□ -0.68
USB1-207ENST00000563149 SSX9Q7RTT3 188 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 GCSAMQ8N6F7 178 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 OR2Z1Q8NG97 314 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 Q8TCH9 128 aa10.82□□□□□ -0.68
USB1-207ENST00000563149 CORO2AQ92828 525 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms