RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 FAM90A8PA6NJQ4 464 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 IGHG3P01860 377 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 SLC25A5P05141 298 aaKnown RBP7.88□□□□□ -1.15
CDH1-205ENST00000562836 FAM90A13PP0C7W8 464 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 FAM90A24PP0C7X0 464 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 S100A3P33764 101 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 HMGA2P52926 109 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 CCL23P55773 120 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 ZNF141Q15928 474 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 LINC00336Q6ZUF6 198 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 FSCN3Q9NQT6 498 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 C21orf62Q9NYP8 219 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 GNG13Q9P2W3 67 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 CKLFQ9UBR5 152 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 MCM3APO60318 1980 aa7.88□□□□□ -1.15
CDH1-205ENST00000562836 ARID1AO14497 2285 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 A0A1W2PS18 150 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 hDV102S1A0JD36 115 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 H3BMH7 237 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 PLPP1O14494 284 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 Q499Y3 187 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 DTX2Q86UW9 622 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 TEX45Q8NA69 505 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 FGF11Q92914 225 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 SPRY4Q9C004 299 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 ARID1BQ8NFD5 2236 aaPredicted RBP7.87□□□□□ -1.15
CDH1-205ENST00000562836 LOC102723971A0A1B0GUV8 181 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 NXPH3O95157 252 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 OR1D5P58170 312 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 TNFAIP6P98066 277 aaPredicted RBP7.87□□□□□ -1.15
CDH1-205ENST00000562836 SP4Q02446 784 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 TXNDC8Q6A555 127 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 Q6ZSR3 168 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 LILRA3Q8N6C8 439 aaPredicted RBP7.87□□□□□ -1.15
CDH1-205ENST00000562836 TMEM229BQ8NBD8 167 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 STAG3L4Q8TBR4 150 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 C1orf123Q9NWV4 160 aa7.87□□□□□ -1.15
CDH1-205ENST00000562836 KLK5Q9Y337 293 aaPredicted RBP7.87□□□□□ -1.15
CDH1-205ENST00000562836 LRRC3CA6NJW4 275 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 ZFP92A6NM28 416 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 ZFAND5O76080 213 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 DRD3P35462 400 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 CCL11P51671 97 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 HERVK_113P63121 156 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 RAE1P78406 368 aaKnown RBP7.86□□□□□ -1.15
CDH1-205ENST00000562836 Q0VG73 95 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 LCNL1Q6ZST4 164 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 PPP1R32Q7Z5V6 425 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 SGPP2Q8IWX5 399 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 PIANPQ8IYJ0 282 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 TIMD4Q96H15 378 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 SMIM7Q9BQ49 75 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 DHDHQ9UQ10 334 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 TRAV18A0A075B6X5 111 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 IGKV6D-21A0A0A0MT36 114 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 TRAV5A0A0B4J249 113 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 A0A1B0GWB2 263 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 A0A1W2PRD5 423 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 A0A1W2PRF3 423 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 A0A1W2PRM7 423 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 NDUFS4O43181 175 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 NPPBP16860 134 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 SLC35B1P78383 322 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 HHEXQ03014 270 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 ELOCQ15369 112 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 RPS4Y2Q8TD47 263 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 SNRNP40Q96DI7 357 aaKnown RBP7.86□□□□□ -1.15
CDH1-205ENST00000562836 C2orf48Q96LS8 159 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 DLL3Q9NYJ7 618 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 KLK13Q9UKR3 277 aa7.86□□□□□ -1.15
CDH1-205ENST00000562836 NUP214P35658 2090 aaPredicted RBP7.85□□□□□ -1.15
CDH1-205ENST00000562836 ARL6IP5O75915 188 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 APOHP02749 345 aaPredicted RBP7.85□□□□□ -1.15
CDH1-205ENST00000562836 MRPL3P09001 348 aaKnown RBP7.85□□□□□ -1.15
CDH1-205ENST00000562836 ZNF708P17019 499 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 ZNF20P17024 532 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 CBLN1P23435 193 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 RPL23P62829 140 aaKnown RBP7.85□□□□□ -1.15
CDH1-205ENST00000562836 RPS28P62857 69 aaKnown RBP7.85□□□□□ -1.15
CDH1-205ENST00000562836 FMODQ06828 376 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 HLA-DRB5Q30154 266 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 IBA57Q5T440 356 aaKnown RBP7.85□□□□□ -1.15
CDH1-205ENST00000562836 TRPT1Q86TN4 253 aaKnown RBP7.85□□□□□ -1.15
CDH1-205ENST00000562836 MRPL30Q8TCC3 161 aaKnown RBP7.85□□□□□ -1.15
CDH1-205ENST00000562836 GFI1Q99684 422 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 GNB4Q9HAV0 340 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 MDFICQ9P1T7 246 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 WDR90Q96KV7 1748 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 ANK1P16157 1881 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 ZNF324O75467 553 aaPredicted RBP7.85□□□□□ -1.15
CDH1-205ENST00000562836 MT-ND6P03923 174 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 GABRG2P18507 467 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 SLC25A47Q6Q0C1 308 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 Q6ZT83 130 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 TMEM219Q86XT9 240 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 OR1L3Q8NH93 324 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 DDIT4LQ96D03 193 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 KCNS1Q96KK3 526 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 PGLYRP3Q96LB9 341 aa7.85□□□□□ -1.15
CDH1-205ENST00000562836 EMC9Q9Y3B6 208 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms