RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 ZBED9Q6R2W3 1325 aa3□□□□□ -1.93
SMG1-204ENST00000561940 D6RAR5 112 aa3□□□□□ -1.93
SMG1-204ENST00000561940 TOX3O15405 576 aaPredicted RBP3□□□□□ -1.93
SMG1-204ENST00000561940 GPR75O95800 540 aa3□□□□□ -1.93
SMG1-204ENST00000561940 PET100P0DJ07 73 aa3□□□□□ -1.93
SMG1-204ENST00000561940 HSPA13P48723 471 aa3□□□□□ -1.93
SMG1-204ENST00000561940 TPM4P67936 248 aa3□□□□□ -1.93
SMG1-204ENST00000561940 EXOC3L4Q17RC7 722 aa3□□□□□ -1.93
SMG1-204ENST00000561940 SPNS3Q6ZMD2 512 aa3□□□□□ -1.93
SMG1-204ENST00000561940 C3orf22Q8N5N4 141 aa3□□□□□ -1.93
SMG1-204ENST00000561940 KRTCAP2Q8N6L1 136 aa3□□□□□ -1.93
SMG1-204ENST00000561940 BPIFB6Q8NFQ5 453 aa3□□□□□ -1.93
SMG1-204ENST00000561940 TSTD1Q8NFU3 115 aa3□□□□□ -1.93
SMG1-204ENST00000561940 KCTD4Q8WVF5 259 aa3□□□□□ -1.93
SMG1-204ENST00000561940 CMBLQ96DG6 245 aa3□□□□□ -1.93
SMG1-204ENST00000561940 SLC25A44Q96H78 314 aaPredicted RBP3□□□□□ -1.93
SMG1-204ENST00000561940 COL5A1P20908 1838 aaPredicted RBP3□□□□□ -1.93
SMG1-204ENST00000561940 MYH13Q9UKX3 1938 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 ZNF532Q9HCE3 1301 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 ATG2BQ96BY7 2078 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 NF1P21359 2839 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 PLXNA4Q9HCM2 1894 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 SPAG17Q6Q759 2223 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 ARGFXA6NJG6 315 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 CCL16O15467 120 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 SYNGR1O43759 233 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 ASS1P00966 412 aaKnown RBP2.99□□□□□ -1.93
SMG1-204ENST00000561940 TPM3P06753 285 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 ACTR1BP42025 376 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 STC1P52823 247 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 DLX6P56179 175 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 PAFAH1B3Q15102 231 aaKnown RBP2.99□□□□□ -1.93
SMG1-204ENST00000561940 ZNHIT3Q15649 155 aaPredicted RBP2.99□□□□□ -1.93
SMG1-204ENST00000561940 ZNRF2Q8NHG8 242 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 HDHD2Q9H0R4 259 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 ALX4Q9H161 411 aaPredicted RBP2.99□□□□□ -1.93
SMG1-204ENST00000561940 KCNIP2Q9NS61 270 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 GINS2Q9Y248 185 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 FLNCQ14315 2725 aa2.99□□□□□ -1.93
SMG1-204ENST00000561940 MGAQ8IWI9 3026 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 ZFHX3Q15911 3703 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 F5H5K5 113 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 AQP9O43315 295 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 F8A1P23610 371 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 PSMB6P28072 239 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 SKP1P63208 163 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 MMDQ15546 238 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 ZCWPW2Q504Y3 356 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 TIMM23BQ5SRD1 257 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 TTC33Q6PID6 262 aaPredicted RBP2.98□□□□□ -1.93
SMG1-204ENST00000561940 PLEKHG7Q6ZR37 379 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 LRP11Q86VZ4 500 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 FAM9CQ8IZT9 166 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 FER1L6-AS1Q8NA97 138 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 LY6G5BQ8NDX9 201 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 OR4P4Q8NGL7 312 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 DCUN1D5Q9BTE7 237 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 ARL6Q9H0F7 186 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 PHLDA3Q9Y5J5 127 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 OR51B4Q9Y5P0 310 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 NBASA2RRP1 2371 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 RELNP78509 3460 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 ANKHD1Q8IWZ3 2542 aaKnown RBP2.98□□□□□ -1.93
SMG1-204ENST00000561940 PLIN4Q96Q06 1357 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 PARP14Q460N5 1801 aa2.98□□□□□ -1.93
SMG1-204ENST00000561940 NBEAL1Q6ZS30 2694 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 WDFY3Q8IZQ1 3526 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 GOLGA8RI6L899 631 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 ADAP1O75689 374 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 FAM3AP98173 230 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 SKP2Q13309 424 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 NIPAL1Q6NVV3 410 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 Q8NAQ8 132 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 LFNGQ8NES3 379 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 OR9I1Q8NGQ6 314 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 C7orf50Q9BRJ6 194 aaKnown RBP2.97□□□□□ -1.93
SMG1-204ENST00000561940 SLC23A2Q9UGH3 650 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 NAGKQ9UJ70 344 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 CARHSP1Q9Y2V2 147 aaKnown RBP2.97□□□□□ -1.93
SMG1-204ENST00000561940 TRPM6Q9BX84 2022 aa2.97□□□□□ -1.93
SMG1-204ENST00000561940 TSC2P49815 1807 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 HIVEP1P15822 2718 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 MYH7BA7E2Y1 1941 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 HIVEP3Q5T1R4 2406 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 IGKV1-12A0A0C4DH73 117 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 GOLGA6L10A6NI86 522 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 LECT2O14960 151 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 IGKV1D-12P01611 117 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 GYPCP04921 128 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 GUSBP08236 651 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 INPP1P49441 399 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 DEFA6Q01524 100 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 CLEC12BQ2HXU8 276 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 HSP90B2PQ58FF3 399 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 LYZL2Q7Z4W2 148 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 MTERF4Q7Z6M4 381 aaKnown RBP2.96□□□□□ -1.94
SMG1-204ENST00000561940 HS3ST5Q8IZT8 346 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 BLIDQ8IZY5 108 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 OR5D18Q8NGL1 313 aa2.96□□□□□ -1.94
SMG1-204ENST00000561940 SPPL2BQ8TCT7 592 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms