RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 TIPINQ9BVW5 301 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 TREM1Q9NP99 234 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 ZNHIT6Q9NWK9 470 aaKnown RBP0.9□□□□□ -2.27
USP8-218ENST00000561330 A0A1W2PP64 1363 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 THSD7AQ9UPZ6 1657 aa0.9□□□□□ -2.27
USP8-218ENST00000561330 NUP160Q12769 1436 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 RIMS2Q9UQ26 1411 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 NUMA1Q14980 2115 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 ABCC12Q96J65 1359 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 TRAV38-1A0A0B4J264 116 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 TEX50A0A1B0GTY4 177 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 C5orf49A4QMS7 147 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 TRAPPC13A5PLN9 417 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 SMLR1H3BR10 107 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 H3BT86 120 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 ORC5O43913 435 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 ORM1P02763 201 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 DEFA4P12838 97 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 EVX1P49640 407 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 HADHBP55084 474 aaKnown RBP0.89□□□□□ -2.27
USP8-218ENST00000561330 PLPPR5Q32ZL2 321 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 TMEM86AQ8N2M4 240 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 RAB2BQ8WUD1 216 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 TP53TG1Q9Y2A0 90 aa0.89□□□□□ -2.27
USP8-218ENST00000561330 DIDO1Q9BTC0 2240 aaKnown RBP0.89□□□□□ -2.27
USP8-218ENST00000561330 NOTCH1P46531 2555 aa0.88□□□□□ -2.27
USP8-218ENST00000561330 RPL28P46779 137 aaKnown RBP0.88□□□□□ -2.27
USP8-218ENST00000561330 RAB14P61106 215 aa0.88□□□□□ -2.27
USP8-218ENST00000561330 HLA-DRB3P79483 266 aa0.88□□□□□ -2.27
USP8-218ENST00000561330 C9orf64Q5T6V5 341 aa0.88□□□□□ -2.27
USP8-218ENST00000561330 FAM173BQ6P4H8 233 aa0.88□□□□□ -2.27
USP8-218ENST00000561330 RASSF6Q6ZTQ3 369 aa0.88□□□□□ -2.27
USP8-218ENST00000561330 RIBC1Q8N443 379 aaPredicted RBP0.88□□□□□ -2.27
USP8-218ENST00000561330 SLC37A2Q8TED4 501 aa0.88□□□□□ -2.27
USP8-218ENST00000561330 ZNF514Q96K75 400 aaPredicted RBP0.88□□□□□ -2.27
USP8-218ENST00000561330 ODF3Q96PU9 254 aa0.88□□□□□ -2.27
USP8-218ENST00000561330 CFAP45Q9UL16 551 aa0.88□□□□□ -2.27
USP8-218ENST00000561330 WDR90Q96KV7 1748 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 FLT4P35916 1363 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 TMED7-TICAM2A0A0A6YYA0 188 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 FTCDNL1E5RQL4 147 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 SLCO1A2P46721 670 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 RPS24P62847 133 aaKnown RBP0.87□□□□□ -2.27
USP8-218ENST00000561330 PMS2P3Q13401 168 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 DEFB115Q30KQ5 88 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 SPATA24Q86W54 205 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 Q8N2B8 174 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 C15orf53Q8NAA6 179 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 ANKRD36BP1Q96IX9 119 aa0.87□□□□□ -2.27
USP8-218ENST00000561330 CHD2O14647 1828 aaKnown RBP0.87□□□□□ -2.27
USP8-218ENST00000561330 FREM1Q5H8C1 2179 aa0.86□□□□□ -2.27
USP8-218ENST00000561330 A0A1B0GW54 56 aa0.86□□□□□ -2.27
USP8-218ENST00000561330 IL6P05231 212 aa0.86□□□□□ -2.27
USP8-218ENST00000561330 JOSD1Q15040 202 aaPredicted RBP0.86□□□□□ -2.27
USP8-218ENST00000561330 DCXRQ7Z4W1 244 aa0.86□□□□□ -2.27
USP8-218ENST00000561330 SYCE1Q8N0S2 351 aa0.86□□□□□ -2.27
USP8-218ENST00000561330 RPP25LQ8N5L8 163 aaKnown RBP0.86□□□□□ -2.27
USP8-218ENST00000561330 CHST6Q9GZX3 395 aa0.86□□□□□ -2.27
USP8-218ENST00000561330 SLC22A4Q9H015 551 aa0.86□□□□□ -2.27
USP8-218ENST00000561330 HES4Q9HCC6 221 aa0.86□□□□□ -2.27
USP8-218ENST00000561330 NAT8Q9UHE5 227 aa0.86□□□□□ -2.27
USP8-218ENST00000561330 TMEM269A0A1B0GVZ9 245 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 TMEM213A2RRL7 107 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 MEIS3P1A6NDR6 274 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 PPBPP02775 128 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 TRGC1P0CF51 173 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 PET100P0DJ07 73 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 PRB4P10163 310 aaPredicted RBP0.85□□□□□ -2.27
USP8-218ENST00000561330 CLDN12P56749 244 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 ACSM3Q53FZ2 586 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 SAPCD1Q5SSQ6 148 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 CCL13Q99616 98 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 MS4A6AQ9H2W1 248 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 CD300AQ9UGN4 299 aa0.85□□□□□ -2.27
USP8-218ENST00000561330 SCAF11Q99590 1463 aaKnown RBP0.85□□□□□ -2.27
USP8-218ENST00000561330 OR51F1A6NGY5 319 aa0.84□□□□□ -2.27
USP8-218ENST00000561330 ATP8B1O43520 1251 aa0.84□□□□□ -2.27
USP8-218ENST00000561330 SCN2BO60939 215 aa0.84□□□□□ -2.27
USP8-218ENST00000561330 TFPTP0C1Z6 253 aa0.84□□□□□ -2.27
USP8-218ENST00000561330 CD40LGP29965 261 aa0.84□□□□□ -2.27
USP8-218ENST00000561330 DNM1P34Q6PK57 102 aa0.84□□□□□ -2.27
USP8-218ENST00000561330 DYNAPQ8N1N2 210 aa0.84□□□□□ -2.27
USP8-218ENST00000561330 C22orf24Q9Y442 160 aa0.84□□□□□ -2.27
USP8-218ENST00000561330 BAZ2BQ9UIF8 2168 aaKnown RBP0.84□□□□□ -2.28
USP8-218ENST00000561330 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.28
USP8-218ENST00000561330 COX7A2LO14548 114 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 APOMO95445 188 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 MSNP26038 577 aaKnown RBP0.83□□□□□ -2.28
USP8-218ENST00000561330 REG1BP48304 166 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 NAA40Q86UY6 237 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 C9orf163Q8N9P6 203 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 ASB13Q8WXK3 278 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 TESCQ96BS2 214 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 GNPNAT1Q96EK6 184 aaPredicted RBP0.83□□□□□ -2.28
USP8-218ENST00000561330 PACRGQ96M98 296 aaPredicted RBP0.83□□□□□ -2.28
USP8-218ENST00000561330 XAGE1AQ9HD64 81 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 EURLQ9NYK6 297 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 ROS1P08922 2347 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 CHD5Q8TDI0 1954 aa0.83□□□□□ -2.28
USP8-218ENST00000561330 IGKV1-9A0A0C4DH69 117 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms