RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MARC2Q969Z3 335 aa13.78□□□□□ -0.2
TPM1-226ENST00000560959 ZNF430Q9H8G1 570 aaPredicted RBP13.78□□□□□ -0.2
TPM1-226ENST00000560959 KLK9Q9UKQ9 250 aa13.78□□□□□ -0.2
TPM1-226ENST00000560959 TRBV6-7A0A0A0MS04 114 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 SCAF4O95104 1147 aaKnown RBP13.77□□□□□ -0.21
TPM1-226ENST00000560959 DUTP33316 252 aaKnown RBP13.77□□□□□ -0.21
TPM1-226ENST00000560959 ARL3P36405 182 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 WNT4P56705 351 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 IDO2Q6ZQW0 420 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 SLC38A6Q8IZM9 456 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 OR2C3Q8N628 320 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 OR1L6Q8NGR2 347 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 OR10J5Q8NHC4 309 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 C5orf30Q96GV9 206 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 CABLES2Q9BTV7 478 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 PECRQ9BY49 303 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 KCNK15Q9H427 330 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 SMPD3Q9NY59 655 aaPredicted RBP13.77□□□□□ -0.21
TPM1-226ENST00000560959 FBXL7Q9UJT9 491 aa13.77□□□□□ -0.21
TPM1-226ENST00000560959 ZNF320A2RRD8 509 aa13.76□□□□□ -0.21
TPM1-226ENST00000560959 NPIPB5A8MRT5 1133 aa13.76□□□□□ -0.21
TPM1-226ENST00000560959 FABP7O15540 132 aa13.76□□□□□ -0.21
TPM1-226ENST00000560959 CRYZL1O95825 349 aa13.76□□□□□ -0.21
TPM1-226ENST00000560959 RBM48Q5RL73 367 aaKnown RBP13.76□□□□□ -0.21
TPM1-226ENST00000560959 RBPMS2Q6ZRY4 209 aaKnown RBP13.76□□□□□ -0.21
TPM1-226ENST00000560959 STPG3Q8N7X2 389 aa13.76□□□□□ -0.21
TPM1-226ENST00000560959 ARHGAP5-AS1Q96IT6 56 aa13.76□□□□□ -0.21
TPM1-226ENST00000560959 CENPOQ9BU64 300 aa13.76□□□□□ -0.21
TPM1-226ENST00000560959 DNAH6Q9C0G6 4158 aa13.75□□□□□ -0.21
TPM1-226ENST00000560959 BET1O15155 118 aa13.75□□□□□ -0.21
TPM1-226ENST00000560959 SAA1P0DJI8 122 aaPredicted RBP13.75□□□□□ -0.21
TPM1-226ENST00000560959 GALP22466 123 aa13.75□□□□□ -0.21
TPM1-226ENST00000560959 INSL4Q14641 139 aa13.75□□□□□ -0.21
TPM1-226ENST00000560959 DEFB135Q30KP9 77 aa13.75□□□□□ -0.21
TPM1-226ENST00000560959 CLEC19AQ6UXS0 136 aa13.75□□□□□ -0.21
TPM1-226ENST00000560959 SETD9Q8NE22 299 aa13.75□□□□□ -0.21
TPM1-226ENST00000560959 CCDC140Q96MF4 163 aa13.75□□□□□ -0.21
TPM1-226ENST00000560959 MRPL27Q9P0M9 148 aaKnown RBP13.75□□□□□ -0.21
TPM1-226ENST00000560959 LINC00473A8K010 186 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 MYL12BO14950 172 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 CDK1P06493 297 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 CRYGCP07315 174 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 CD3GP09693 182 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 PSMB6P28072 239 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 ELLP55199 621 aaPredicted RBP13.74□□□□□ -0.21
TPM1-226ENST00000560959 TCTAP57738 103 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 IGSF11Q5DX21 431 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 BTNL8Q6UX41 500 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 CEACAM19Q7Z692 300 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 NANOGP1Q8N7R0 232 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 EEF1AKMT3Q96AZ1 226 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 FANCD2OSQ96PS1 177 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 SPAG8Q99932 426 aaPredicted RBP13.74□□□□□ -0.21
TPM1-226ENST00000560959 C5orf66Q9H5L9 145 aa13.74□□□□□ -0.21
TPM1-226ENST00000560959 RBM7Q9Y580 266 aaKnown RBP13.74□□□□□ -0.21
TPM1-226ENST00000560959 ERICH4A6NGS2 130 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 TEX22C9J3V5 150 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 DHFRP00374 187 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 RANBP1P43487 201 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 SSX1Q16384 188 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 HSD17B12Q53GQ0 312 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 PLAC9Q5JTB6 97 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 OR56B1Q8NGI3 324 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 SLC2A9Q9NRM0 540 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 SELENOKQ9Y6D0 94 aa13.73□□□□□ -0.21
TPM1-226ENST00000560959 TRBV7-1A0A0A6YYK4 115 aa13.72□□□□□ -0.21
TPM1-226ENST00000560959 SLC17A2O00624 439 aa13.72□□□□□ -0.21
TPM1-226ENST00000560959 UCHL1P09936 223 aa13.72□□□□□ -0.21
TPM1-226ENST00000560959 GSTT2P0CG29 244 aa13.72□□□□□ -0.21
TPM1-226ENST00000560959 GSTT2BP0CG30 244 aa13.72□□□□□ -0.21
TPM1-226ENST00000560959 HIST1H1BP16401 226 aaKnown RBP13.72□□□□□ -0.21
TPM1-226ENST00000560959 MRPS15P82914 257 aaKnown RBP13.72□□□□□ -0.21
TPM1-226ENST00000560959 C10orf55Q5SWW7 151 aa13.72□□□□□ -0.21
TPM1-226ENST00000560959 PQLC1Q8N2U9 271 aa13.72□□□□□ -0.21
TPM1-226ENST00000560959 VSTM2AQ8TAG5 236 aa13.72□□□□□ -0.21
TPM1-226ENST00000560959 FYTTD1Q96QD9 318 aaKnown RBP13.72□□□□□ -0.21
TPM1-226ENST00000560959 OR51E2Q9H255 320 aa13.72□□□□□ -0.21
TPM1-226ENST00000560959 DPPA5A6NC42 116 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 HMX3A6NHT5 357 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 TSPAN4O14817 238 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 IL6RP08887 468 aaPredicted RBP13.71□□□□□ -0.21
TPM1-226ENST00000560959 MYOD1P15172 320 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 MAS1LP35410 378 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 P2RY14Q15391 338 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 ZNF585BQ52M93 769 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 CXorf58Q96LI9 332 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 MFFQ9GZY8 342 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 PSORS1C1Q9UIG5 152 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 UFC1Q9Y3C8 167 aa13.71□□□□□ -0.21
TPM1-226ENST00000560959 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 CLEC3BP05452 202 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 FCGR3AP08637 254 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 ZNF735P0CB33 412 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 UNQ9165/PRO28630Q6UXU0 137 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 GALNT14Q96FL9 552 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 GINS4Q9BRT9 223 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 DCUN1D5Q9BTE7 237 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 PLGRKTQ9HBL7 147 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 S100A14Q9HCY8 104 aa13.7□□□□□ -0.22
TPM1-226ENST00000560959 PLCXD1Q9NUJ7 323 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms