RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 LRRC75AQ8NAA5 344 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 C15orf53Q8NAA6 179 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 OR5A2Q8NGI9 324 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 OR4D6Q8NGJ1 314 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 OR52B4Q8NGK2 314 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 OR52J3Q8NH60 311 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 FAM81AQ8TBF8 368 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 DYNLRB2Q8TF09 96 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 LZICQ8WZA0 190 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 AQP3Q92482 292 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 DGCR14Q96DF8 476 aaKnown RBP1.97□□□□□ -2.09
LRRC28-218ENST00000560236 GALNT14Q96FL9 552 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 MBOAT4Q96T53 435 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 HSPB9Q9BQS6 159 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 C1orf50Q9BV19 199 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 C20orf27Q9GZN8 174 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 C6orf62Q9GZU0 229 aaPredicted RBP1.97□□□□□ -2.09
LRRC28-218ENST00000560236 SLC5A7Q9GZV3 580 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 OR51I2Q9H344 312 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 RGCCQ9H4X1 137 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 NIPAL2Q9H841 368 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 NMNAT1Q9HAN9 279 aaPredicted RBP1.97□□□□□ -2.09
LRRC28-218ENST00000560236 TPT1P8Q9HAU6 139 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 ZNF286AQ9HBT8 521 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 CENPMQ9NSP4 180 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 CYB5R1Q9UHQ9 305 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 RIMS3Q9UJD0 308 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 RAB26Q9ULW5 256 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 SLC22A13Q9Y226 551 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 POLDIP2Q9Y2S7 368 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 FIS1Q9Y3D6 152 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 LHFPL6Q9Y693 200 aa1.97□□□□□ -2.09
LRRC28-218ENST00000560236 MUC2Q02817 5179 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 DEFB131BA0A096LNP1 70 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 TRAV25A0A0B4J276 109 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 IGHV1-3A0A0C4DH29 117 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 NBDYA0A0U1RRE5 68 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 FAM231BA6NCW3 169 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 CPSF4LA6NMK7 179 aaKnown RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 ZNF729A6NN14 1252 aaPredicted RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 G3V318 75 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 H3BUA1 57 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 CXCR6O00574 342 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 COPEO14579 308 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 TPST1O60507 370 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 ZNF737O75373 536 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 SMR3BP02814 79 aaPredicted RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 IL6P05231 212 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 CD14P08571 375 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 SNRPCP09234 159 aaKnown RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 CDK2P24941 298 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 NPY1RP25929 384 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 HLA-DMBP28068 263 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 ASIPP42127 132 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 RPL5P46777 297 aaKnown RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 MRPL19P49406 292 aaKnown RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 CNN1P51911 297 aaKnown RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 AQP4P55087 323 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 SYNJ2BPP57105 145 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 LINC00315P59091 139 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 CDK6Q00534 326 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 STX3Q13277 289 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 RGNQ15493 299 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 RPEL1Q2QD12 228 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 CEACAM21Q3KPI0 293 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 IFI44LQ53G44 452 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 AKIRIN2Q53H80 203 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 ZNF660Q6AZW8 331 aaPredicted RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 ZFP1Q6P2D0 407 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 EPGNQ6UW88 154 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 C2orf66Q6UXQ4 117 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 TCF23Q7RTU1 214 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 ARPINQ7Z6K5 226 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 MOB3BQ86TA1 216 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 LINC00596Q86U02 117 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 SPATA24Q86W54 205 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 ZNF573Q86YE8 665 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 ZDHHC21Q8IVQ6 265 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 SLC38A6Q8IZM9 456 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 ASCC1Q8N9N2 400 aaKnown RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 OR10A7Q8NGE5 316 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 OR8B12Q8NGG6 310 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 OR13F1Q8NGS4 319 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 OR4A5Q8NH83 315 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 TMEM239Q8WW34 195 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 PIGCQ92535 297 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 MCUR1Q96AQ8 359 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 SGK3Q96BR1 496 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 REEP6Q96HR9 211 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 C9orf85Q96MD7 179 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 SPACA5Q96QH8 159 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 OR52E6Q96RD3 313 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 NICN1Q9BSH3 213 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 MRPS26Q9BYN8 205 aaKnown RBP1.96□□□□□ -2.1
LRRC28-218ENST00000560236 WFDC10AQ9H1F0 79 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 SYT4Q9H2B2 425 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 VCX3BQ9H321 246 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 HES4Q9HCC6 221 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 VCX3AQ9NNX9 186 aa1.96□□□□□ -2.1
LRRC28-218ENST00000560236 MBD2Q9UBB5 411 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms