RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 DMBX1Q8NFW5 382 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 OR8H1Q8NGG4 311 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 CLEC7AQ9BXN2 247 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 GSX1Q9H4S2 264 aaPredicted RBP13.4□□□□□ -0.26
TPM1-219ENST00000559397 RCL1Q9Y2P8 373 aaKnown RBP13.4□□□□□ -0.26
TPM1-219ENST00000559397 NSG2Q9Y328 171 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 MMP24Q9Y5R2 645 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 BCL2L11O43521 198 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 S1PR2O95136 353 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 FSHBP01225 129 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 IGHV4-38-2P0DP08 117 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 UBE2E1P51965 193 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 OR2B11Q5JQS5 317 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 CXorf66Q5JRM2 361 aaPredicted RBP13.4□□□□□ -0.26
TPM1-219ENST00000559397 SLC51BQ86UW2 128 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 PDZD9Q8IXQ8 264 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 LYG1Q8N1E2 194 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 OR9G1Q8NH87 305 aa13.4□□□□□ -0.26
TPM1-219ENST00000559397 TRAV40A0A0B4J280 105 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 ODF3BA8MYP8 253 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 J3QR06 171 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 ATG12O94817 140 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 CFDP00746 253 aaPredicted RBP13.39□□□□□ -0.27
TPM1-219ENST00000559397 IGLV1-47P01700 117 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 HKR1P10072 659 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 NUP62P37198 522 aaPredicted RBP13.39□□□□□ -0.27
TPM1-219ENST00000559397 KIR2DS2P43631 304 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 THBS3P49746 956 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 AKR1C2P52895 323 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 ZNF816Q0VGE8 651 aaPredicted RBP13.39□□□□□ -0.27
TPM1-219ENST00000559397 FAM120AOSQ5T036 256 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 ADTRPQ96IZ2 230 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 PLEKHA2Q9HB19 425 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 TMEM160Q9NX00 188 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 COA4Q9NYJ1 87 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 ZNRD1Q9P1U0 126 aa13.39□□□□□ -0.27
TPM1-219ENST00000559397 F8P00451 2351 aa13.38□□□□□ -0.27
TPM1-219ENST00000559397 KANTRA0A1W2PQU2 76 aa13.38□□□□□ -0.27
TPM1-219ENST00000559397 IZUMO4Q1ZYL8 232 aa13.38□□□□□ -0.27
TPM1-219ENST00000559397 ZNF833PQ6ZTB9 187 aa13.38□□□□□ -0.27
TPM1-219ENST00000559397 BEND2Q8NDZ0 799 aa13.38□□□□□ -0.27
TPM1-219ENST00000559397 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
TPM1-219ENST00000559397 CACNG5Q9UF02 275 aa13.38□□□□□ -0.27
TPM1-219ENST00000559397 PRELID3BQ9Y3B1 194 aa13.38□□□□□ -0.27
TPM1-219ENST00000559397 IGHV3OR16-10A0A075B7F0 116 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 IGHV1-69DA0A0B4J2H0 117 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 HPRT1P00492 218 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 IGHV1-69P01742 117 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 EPHA1P21709 976 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 P2RY1P47900 373 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 ZNF137PP52743 207 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 POLR2GP62487 172 aaKnown RBP eCLIP13.37□□□□□ -0.27
TPM1-219ENST00000559397 GPR157Q5UAW9 335 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 ZNF383Q8NA42 475 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 OR4P4Q8NGL7 312 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 NANPQ8TBE9 248 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 S1PR3Q99500 378 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 ARPC5LQ9BPX5 153 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 A0A1W2PRD5 423 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 A0A1W2PRF3 423 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 A0A1W2PRM7 423 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 TOR1AO14656 332 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 FCGR3BO75015 233 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 KRASP01116 189 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 IFNA7P01567 189 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 ARG1P05089 322 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 RPL12P30050 165 aaKnown RBP13.37□□□□□ -0.27
TPM1-219ENST00000559397 G6PCP35575 357 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 HLA-DRB5Q30154 266 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 MIDNQ504T8 468 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 LDLRAD2Q5SZI1 272 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 RUSC1-AS1Q66K80 236 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 FAM71F2Q6NXP2 309 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
TPM1-219ENST00000559397 CT45A6P0DMU7 189 aa13.36□□□□□ -0.27
TPM1-219ENST00000559397 CT45A5P0DMU8 189 aa13.36□□□□□ -0.27
TPM1-219ENST00000559397 CT45A7P0DMV0 189 aa13.36□□□□□ -0.27
TPM1-219ENST00000559397 PRRX1P54821 245 aa13.36□□□□□ -0.27
TPM1-219ENST00000559397 EXOSC2Q13868 293 aaKnown RBP13.36□□□□□ -0.27
TPM1-219ENST00000559397 IL17RELQ6ZVW7 336 aa13.36□□□□□ -0.27
TPM1-219ENST00000559397 ST6GALNAC6Q969X2 333 aa13.36□□□□□ -0.27
TPM1-219ENST00000559397 CYTL1Q9NRR1 136 aa13.36□□□□□ -0.27
TPM1-219ENST00000559397 NUP50Q9UKX7 468 aa13.36□□□□□ -0.27
TPM1-219ENST00000559397 FAM90A26D6RGX4 464 aa13.35□□□□□ -0.27
TPM1-219ENST00000559397 NPFFO15130 113 aa13.35□□□□□ -0.27
TPM1-219ENST00000559397 GPR137BO60478 399 aa13.35□□□□□ -0.27
TPM1-219ENST00000559397 UBA52P62987 128 aaKnown RBP13.35□□□□□ -0.27
TPM1-219ENST00000559397 BRD3OSQ6XYD6 125 aa13.35□□□□□ -0.27
TPM1-219ENST00000559397 Q71RC1 249 aaPredicted RBP13.35□□□□□ -0.27
TPM1-219ENST00000559397 TEX29Q8N6K0 151 aa13.35□□□□□ -0.27
TPM1-219ENST00000559397 OR4S2Q8NH73 311 aa13.35□□□□□ -0.27
TPM1-219ENST00000559397 R3HDM4Q96D70 268 aa13.35□□□□□ -0.27
TPM1-219ENST00000559397 AJUBAQ96IF1 538 aa13.35□□□□□ -0.27
TPM1-219ENST00000559397 MARCH11A6NNE9 402 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 FAM90A9PA6NNJ1 464 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 BUB1B-PAK6H3BSN5 160 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 TMEM50AO95807 157 aa13.34□□□□□ -0.27
TPM1-219ENST00000559397 PVALBP20472 110 aaPredicted RBP13.34□□□□□ -0.27
TPM1-219ENST00000559397 OR10X1Q8NGY0 326 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms