RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 MEF2BQ02080 365 aaPredicted RBP6.75□□□□□ -1.33
RTF1-205ENST00000558298 PLAC9Q5JTB6 97 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 C9orf135Q5VTT2 229 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 CARD17Q5XLA6 110 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 OR8G2PQ6IF36 304 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 C11orf71Q6IPW1 123 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 MDP1Q86V88 176 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 OR2AJ1Q8NGZ0 328 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 CMTM2Q8TAZ6 248 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 ARHGAP5-AS1Q96IT6 56 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 ATG101Q9BSB4 218 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 ST6GALNAC5Q9BVH7 336 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 TMUB1Q9BVT8 246 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 PECRQ9BY49 303 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 KCNK15Q9H427 330 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 WFDC1Q9HC57 220 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 DNAJC4Q9NNZ3 241 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 TUBG2Q9NRH3 451 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 MRPL22Q9NWU5 206 aaKnown RBP6.75□□□□□ -1.33
RTF1-205ENST00000558298 ZNF586Q9NXT0 402 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 BET1LQ9NYM9 111 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 ZNF391Q9UJN7 358 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 RCL1Q9Y2P8 373 aaKnown RBP6.75□□□□□ -1.33
RTF1-205ENST00000558298 POLR3KQ9Y2Y1 108 aaPredicted RBP6.75□□□□□ -1.33
RTF1-205ENST00000558298 MRPS16Q9Y3D3 137 aaKnown RBP6.75□□□□□ -1.33
RTF1-205ENST00000558298 NF1P21359 2839 aa6.75□□□□□ -1.33
RTF1-205ENST00000558298 A0A096LPE4 126 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 A0A0U1RQV5 110 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 A0A1W2PPZ6 126 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 M0R1B8 84 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 P2RY10O00398 339 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 DIRAS3O95661 229 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 NRASP01111 189 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 KRASP01116 189 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 TTRP02766 147 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 LCATP04180 440 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 AADACP22760 399 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 BLVRBP30043 206 aaPredicted RBP6.74□□□□□ -1.33
RTF1-205ENST00000558298 GLRXP35754 106 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 GUCA1AP43080 201 aaPredicted RBP6.74□□□□□ -1.33
RTF1-205ENST00000558298 THBS3P49746 956 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 FHITP49789 147 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 ZNF83P51522 516 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 YPEL3P61236 119 aaPredicted RBP6.74□□□□□ -1.33
RTF1-205ENST00000558298 RBX1P62877 108 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 SUMO1P63165 101 aaKnown RBP6.74□□□□□ -1.33
RTF1-205ENST00000558298 FMODQ06828 376 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 PMCHL1Q16048 86 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 TMEM249Q2WGJ8 235 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 DEFB113Q30KQ7 82 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 KRTAP27-1Q3LI81 207 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 TEX38Q6PEX7 206 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 Q6ZS49 121 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 ZNF695Q8IW36 515 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 C11orf42Q8N5U0 333 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 TMEM252Q8N6L7 170 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 BHLHE23Q8NDY6 225 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 OR5C1Q8NGR4 320 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 MSI2Q96DH6 328 aaKnown RBP6.74□□□□□ -1.33
RTF1-205ENST00000558298 SLAMF6Q96DU3 332 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 CIB3Q96Q77 187 aaPredicted RBP6.74□□□□□ -1.33
RTF1-205ENST00000558298 TBX15Q96SF7 602 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 AMELYQ99218 206 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 TMEM222Q9H0R3 208 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 SH3BGRL3Q9H299 93 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 C11orf1Q9H5F2 150 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 SLC2A9Q9NRM0 540 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 SLC35D1Q9NTN3 355 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 PLEKHJ1Q9NW61 149 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 GNG13Q9P2W3 67 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 ACANP16112 2415 aa6.74□□□□□ -1.33
RTF1-205ENST00000558298 TRAV30A0A087WSZ9 112 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A10PA6NDY2 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A18PA6NE21 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A16PA6NEW6 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A20PA6NIJ5 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A8PA6NJQ4 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A7PA6NKC0 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 ZNF850A8MQ14 1090 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A22PA8MWA6 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A12PA8MX19 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A5PA8MXJ8 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A23PA8MXZ1 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A26D6RGX4 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 E7EQL1 145 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 J3QR06 171 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 TMPRSS2O15393 492 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 SOCS1O15524 211 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 TCF21O43680 179 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 PLAUP00749 431 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A15PP0C7V4 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A13PP0C7W8 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A14PP0C7W9 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 FAM90A24PP0C7X0 464 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 IRF2P14316 349 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 RAC2P15153 192 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 APOBEC3AP31941 199 aaPredicted RBP6.73□□□□□ -1.33
RTF1-205ENST00000558298 APLNRP35414 380 aa6.73□□□□□ -1.33
RTF1-205ENST00000558298 TMEM50BP56557 158 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms