RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 OR2B11Q5JQS5 317 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 PRAMEF5Q5TYX0 476 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 NCR3LG1Q68D85 454 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 FAM71F2Q6NXP2 309 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 ZNF788Q6ZQV5 615 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 ASCL5Q7RTU5 278 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 SLC16A13Q7RTY0 426 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 Q8N3U1 123 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 CISD2Q8N5K1 135 aaKnown RBP6.89□□□□□ -1.31
SPG11-209ENST00000558253 CYB561D1Q8N8Q1 229 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 C8orf31Q8N9H6 132 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 OR10G9Q8NGN4 311 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 OR10G7Q8NGN6 311 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 ITLN1Q8WWA0 313 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 WFDC12Q8WWY7 111 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 DDB2Q92466 427 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 RAB1CQ92928 201 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 C5orf30Q96GV9 206 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 BTF3L4Q96K17 158 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 RBM14Q96PK6 669 aaKnown RBP6.89□□□□□ -1.31
SPG11-209ENST00000558253 TMEM204Q9BSN7 226 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 RSG1Q9BU20 258 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 ABHD14AQ9BUJ0 271 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 GAL3ST2Q9H3Q3 398 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 GCM1Q9NP62 436 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 IDI2-AS1Q9NZ38 188 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 JKAMPQ9P055 326 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 FOXA2Q9Y261 457 aaPredicted RBP6.89□□□□□ -1.31
SPG11-209ENST00000558253 WDR83OSQ9Y284 106 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 ZNF835Q9Y2P0 537 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 ZNF257Q9Y2Q1 563 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 MED12LQ86YW9 2145 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 DNAJC13O75165 2243 aa6.89□□□□□ -1.31
SPG11-209ENST00000558253 IGHV3-64DA0A0J9YX35 117 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 LINC00473A8K010 186 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 SEC14L6B5MCN3 397 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 TSTD3H0UI37 97 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 CLDN34H7C241 214 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 SLC31A2O15432 143 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 PDE6DO43924 150 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 VENTXO95231 258 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 IGHV1-46P01743 117 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 EGR1P18146 543 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 CD1BP29016 333 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 OPRK1P41145 380 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 EDDM3BP56851 147 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 MEF2BQ02080 365 aaPredicted RBP6.88□□□□□ -1.31
SPG11-209ENST00000558253 AKIRIN2Q53H80 203 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 OR8G2PQ6IF36 304 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 BTNL3Q6UXE8 466 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 HEPN1Q6WQI6 88 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 REC114Q7Z4M0 266 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 LRP11Q86VZ4 500 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 PRSS33Q8NF86 280 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 RFESDQ8TAC1 157 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 UBALD1Q8TB05 177 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 C2CD4CQ8TF44 421 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 CA5BP1Q8WTZ4 195 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 NEIL1Q96FI4 390 aaPredicted RBP6.88□□□□□ -1.31
SPG11-209ENST00000558253 YPEL4Q96NS1 127 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
SPG11-209ENST00000558253 NPCDR1Q9BY65 106 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 IFI27L2Q9H2X8 130 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 ENY2Q9NPA8 101 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 NAT8Q9UHE5 227 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 PRNDQ9UKY0 176 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 CBY1Q9Y3M2 126 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 LINC00312Q9Y6C7 94 aa6.88□□□□□ -1.31
SPG11-209ENST00000558253 CACNA1GO43497 2377 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 A0A1W2PPH5 198 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 C15orf62A8K5M9 175 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 F8W735 103 aaPredicted RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 FSTL3O95633 263 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 CYB5R3P00387 301 aaPredicted RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 OPN1MWP04001 364 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 OPN1MW2P0DN77 364 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 OPN1MW3P0DN78 364 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 SFTPCP11686 197 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 DAOP14920 347 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 SPINK2P20155 84 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 VDAC2P45880 294 aaPredicted RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 CDX1P47902 265 aaPredicted RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 TDGF1P3P51864 188 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 RND2P52198 227 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 HSPE1P61604 102 aaKnown RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 PKIAP61925 76 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 MRPS11P82912 194 aaKnown RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 ZNF726P1Q15940 193 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 RTL8BQ17RB0 113 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 TMEM241Q24JQ0 296 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 C17orf58Q2M2W7 97 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 FFAR4Q5NUL3 377 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 FAM90A2PQ658T7 463 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 LCN15Q6UWW0 184 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 CYP2G1PQ6ZSU1 146 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 DOLPP1Q86YN1 238 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 RPP25LQ8N5L8 163 aaKnown RBP6.87□□□□□ -1.31
SPG11-209ENST00000558253 FAM24BQ8N5W8 94 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 OR4A5Q8NH83 315 aa6.87□□□□□ -1.31
SPG11-209ENST00000558253 C2orf88Q9BSF0 95 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms