RNA–Protein interactions for RNA: ENST00000557657.5

TMEM260-216, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-216ENST00000557657 CT45A3Q8NHU0 189 aa17.51■□□□□ 0.39
TMEM260-216ENST00000557657 JPT1Q9UK76 154 aa17.51■□□□□ 0.39
TMEM260-216ENST00000557657 TIMM9Q9Y5J7 89 aa17.51■□□□□ 0.39
TMEM260-216ENST00000557657 TNCP24821 2201 aa17.51■□□□□ 0.39
TMEM260-216ENST00000557657 ARFGEF3Q5TH69 2177 aa17.51■□□□□ 0.39
TMEM260-216ENST00000557657 IFITM10A6NMD0 228 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 IFNA10P01566 189 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 FAM216BQ8N7L0 139 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 CCL13Q99616 98 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 GCM1Q9NP62 436 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 GNG10P50151 68 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 TCF15Q12870 199 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 RTP5Q14D33 572 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 GFI1BQ5VTD9 330 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 OR4F5Q8NH21 305 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 OR4A16Q8NH70 328 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 TMEM170AQ8WVE7 144 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 OR4F4Q96R69 305 aa17.5■□□□□ 0.39
TMEM260-216ENST00000557657 PATZ1Q9HBE1 687 aaKnown RBP17.5■□□□□ 0.39
TMEM260-216ENST00000557657 CTXND1A0A1B0GTU2 59 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 YPEL1O60688 119 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 PAGE4O60829 102 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 HPRT1P00492 218 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 GYPAP02724 150 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 ATP6V1FQ16864 119 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 PDZD11Q5EBL8 140 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 C1QL4Q86Z23 238 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 YPEL2Q96QA6 119 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 SEBOXQ9HB31 216 aaPredicted RBP17.49■□□□□ 0.39
TMEM260-216ENST00000557657 DOK5Q9P104 306 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 TCF23Q7RTU1 214 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 FAM169BQ8N8A8 192 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 ZNF709Q8N972 641 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 CIB3Q96Q77 187 aaPredicted RBP17.49■□□□□ 0.39
TMEM260-216ENST00000557657 HEYLQ9NQ87 328 aaPredicted RBP17.49■□□□□ 0.39
TMEM260-216ENST00000557657 TMEM140Q9NV12 185 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 LAMP3Q9UQV4 416 aa17.49■□□□□ 0.39
TMEM260-216ENST00000557657 SAA2-SAA4A0A096LPE2 208 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 IGHV1-46P01743 117 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 SAA2P0DJI9 122 aaPredicted RBP17.48■□□□□ 0.39
TMEM260-216ENST00000557657 UBE2G2P60604 165 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 MZT1Q08AG7 82 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 IGFL3Q6UXB1 125 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 NIT2Q9NQR4 276 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 AURKAIP1Q9NWT8 199 aaPredicted RBP17.48■□□□□ 0.39
TMEM260-216ENST00000557657 RAI1Q7Z5J4 1906 aaPredicted RBP17.48■□□□□ 0.39
TMEM260-216ENST00000557657 TACC2O95359 2948 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 F2RL2O00254 374 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST1H2BKO60814 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST1H2BJP06899 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST1H2BOP23527 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 CD1BP29016 333 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 CCKARP32238 428 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST1H2BBP33778 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST1H2BDP58876 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST1H2BCP62807 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 RELBQ01201 579 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 PAX5Q02548 391 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST2H2BEQ16778 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 VWC2Q2TAL6 325 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.48■□□□□ 0.39
TMEM260-216ENST00000557657 OR5T1Q8NG75 326 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST1H2BHQ93079 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 S1PR3Q99500 378 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST1H2BNQ99877 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 HIST1H2BMQ99879 126 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 SIRT7Q9NRC8 400 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 DSCAML1Q8TD84 2053 aa17.48■□□□□ 0.39
TMEM260-216ENST00000557657 IGLV3-9A0A075B6K5 115 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 SOX15O60248 233 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 IFNA1P01562 189 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 CFHR2P36980 270 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 GNB2P62879 340 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 CCL8P80075 99 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 TNFAIP6P98066 277 aaPredicted RBP17.47■□□□□ 0.39
TMEM260-216ENST00000557657 TRAT1Q6PIZ9 186 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 TCTEX1D1Q8N7M0 179 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 OR51G1Q8NGK1 321 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 SDSLQ96GA7 329 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 FAM210BQ96KR6 192 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 P2RX4Q99571 388 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 OPN1MWP04001 364 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 OPN1MW2P0DN77 364 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 OPN1MW3P0DN78 364 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 CGB3P0DN86 165 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 CGB7P0DN87 165 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 IGF2-ASQ6U949 168 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 TMEM204Q9BSN7 226 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 ACTR3CQ9C0K3 210 aaPredicted RBP17.47■□□□□ 0.39
TMEM260-216ENST00000557657 PARLQ9H300 379 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 CUL9Q8IWT3 2517 aa17.47■□□□□ 0.39
TMEM260-216ENST00000557657 LYG1Q8N1E2 194 aa17.46■□□□□ 0.39
TMEM260-216ENST00000557657 PPP1R35Q8TAP8 253 aa17.46■□□□□ 0.39
TMEM260-216ENST00000557657 NPPCP23582 126 aa17.46■□□□□ 0.39
TMEM260-216ENST00000557657 PSMB3P49720 205 aa17.46■□□□□ 0.39
TMEM260-216ENST00000557657 CR1LQ2VPA4 569 aa17.46■□□□□ 0.39
TMEM260-216ENST00000557657 ABHD5Q8WTS1 349 aa17.46■□□□□ 0.39
TMEM260-216ENST00000557657 CXorf65A6NEN9 183 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 CLDN34H7C241 214 aa17.45■□□□□ 0.38
TMEM260-216ENST00000557657 VDAC2P45880 294 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms