RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 GAFA1Q96PS6 74 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 S1PR3Q99500 378 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 PSMG3Q9BT73 122 aaPredicted RBP15.9■□□□□ 0.14
FOXN3-214ENST00000557258 C1orf196B1AJZ1 125 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 C16orf97H3BN30 126 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 YPEL1O60688 119 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 TDGF1P3P51864 188 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 RND1Q92730 232 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 YPEL2Q96QA6 119 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 TMEM147Q9BVK8 224 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 NPCDR1Q9BY65 106 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 HEYLQ9NQ87 328 aaPredicted RBP15.9■□□□□ 0.14
FOXN3-214ENST00000557258 TMEM140Q9NV12 185 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 OR6C3Q9NZP0 311 aa15.9■□□□□ 0.14
FOXN3-214ENST00000557258 COL6A6A6NMZ7 2263 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 CFHR2P36980 270 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 RAB5BP61020 215 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 STUMQ69YW2 141 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 C1orf174Q8IYL3 243 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 OR10G4Q8NGN3 311 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 OR10G9Q8NGN4 311 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 OR10G7Q8NGN6 311 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 DSCAML1Q8TD84 2053 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 SOX15O60248 233 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 THBDP07204 575 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 KHDC3LQ587J8 217 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 FAM90A2PQ658T7 463 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 TRAT1Q6PIZ9 186 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 TMEM108Q6UXF1 575 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 DPPA3Q6W0C5 159 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 BIN3Q9NQY0 253 aa15.89■□□□□ 0.13
FOXN3-214ENST00000557258 TRGV10A0A0A0MS01 117 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 KBTBD11-OT1A0A1B0GTJ5 212 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 HPRT1P00492 218 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 SERF2P84101 59 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 ADIPOQQ15848 244 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 LINC00518Q8N0U6 118 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 CCL17Q92583 94 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 IL19Q9UHD0 177 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 TRAV38-1A0A0B4J264 116 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 F2RL2O00254 374 aa15.88■□□□□ 0.13
FOXN3-214ENST00000557258 TGIF2-C20orf24A0A0A6YYL0 155 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 NDUFA2O43678 99 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 RPS10P46783 165 aaKnown RBP15.87■□□□□ 0.13
FOXN3-214ENST00000557258 NUBP1P53384 320 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 ERVK-16P61578 105 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 EIF2S3LQ2VIR3 472 aaKnown RBP15.87■□□□□ 0.13
FOXN3-214ENST00000557258 ZNF561Q8N587 486 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 CA5BP1Q8WTZ4 195 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 RPUSD4Q96CM3 377 aaKnown RBP15.87■□□□□ 0.13
FOXN3-214ENST00000557258 SDSLQ96GA7 329 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 GFOD1Q9NXC2 390 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 CXCL1P09341 107 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 CCL3L1P16619 93 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 PRB3Q04118 309 aaPredicted RBP15.87■□□□□ 0.13
FOXN3-214ENST00000557258 TVP23CQ96ET8 276 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 SSX3Q99909 188 aa15.87■□□□□ 0.13
FOXN3-214ENST00000557258 PATZ1Q9HBE1 687 aaKnown RBP15.87■□□□□ 0.13
FOXN3-214ENST00000557258 TRAV1-1A0A0B4J248 108 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 IGKV1-16P04430 117 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 S100A6P06703 90 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 IRF2P14316 349 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 REG1BP48304 166 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 ZNF383Q8NA42 475 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 Q8WTZ3 238 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 MBD3L1Q8WWY6 194 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 PINX1Q96BK5 328 aaKnown RBP15.86■□□□□ 0.13
FOXN3-214ENST00000557258 RHOVQ96L33 236 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 EGLN1Q9GZT9 426 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 UNKLQ9H9P5 680 aaKnown RBP15.86■□□□□ 0.13
FOXN3-214ENST00000557258 LAMP3Q9UQV4 416 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 CGB3P0DN86 165 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 CGB7P0DN87 165 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 TNFSF4P23510 183 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 HOXA1P49639 335 aaPredicted RBP15.86■□□□□ 0.13
FOXN3-214ENST00000557258 RBMS3Q6XE24 437 aaKnown RBP15.86■□□□□ 0.13
FOXN3-214ENST00000557258 ZNF709Q8N972 641 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 FAM122AQ96E09 287 aa15.86■□□□□ 0.13
FOXN3-214ENST00000557258 GATA4P43694 442 aa15.85■□□□□ 0.13
FOXN3-214ENST00000557258 MRPS11P82912 194 aaKnown RBP15.85■□□□□ 0.13
FOXN3-214ENST00000557258 RELBQ01201 579 aa15.85■□□□□ 0.13
FOXN3-214ENST00000557258 PAX5Q02548 391 aa15.85■□□□□ 0.13
FOXN3-214ENST00000557258 TMEM170AQ8WVE7 144 aa15.85■□□□□ 0.13
FOXN3-214ENST00000557258 RAB24Q969Q5 203 aa15.85■□□□□ 0.13
FOXN3-214ENST00000557258 SMDT1Q9H4I9 107 aa15.85■□□□□ 0.13
FOXN3-214ENST00000557258 CISD1Q9NZ45 108 aaKnown RBP15.85■□□□□ 0.13
FOXN3-214ENST00000557258 ANKHD1Q8IWZ3 2542 aaKnown RBP15.85■□□□□ 0.13
FOXN3-214ENST00000557258 TANC2Q9HCD6 1990 aa15.85■□□□□ 0.13
FOXN3-214ENST00000557258 FCN3O75636 299 aa15.85■□□□□ 0.13
FOXN3-214ENST00000557258 NQO2P16083 231 aa15.85■□□□□ 0.13
FOXN3-214ENST00000557258 KIAA0141Q14154 515 aaPredicted RBP15.85■□□□□ 0.13
FOXN3-214ENST00000557258 CIB3Q96Q77 187 aaPredicted RBP15.85■□□□□ 0.13
FOXN3-214ENST00000557258 IFNA4P05014 189 aa15.84■□□□□ 0.13
FOXN3-214ENST00000557258 OR8U8P0C7N1 319 aa15.84■□□□□ 0.13
FOXN3-214ENST00000557258 CD1BP29016 333 aa15.84■□□□□ 0.13
FOXN3-214ENST00000557258 CD81P60033 236 aa15.84■□□□□ 0.13
FOXN3-214ENST00000557258 UBE2G2P60604 165 aa15.84■□□□□ 0.13
FOXN3-214ENST00000557258 TBR1Q16650 682 aa15.84■□□□□ 0.13
FOXN3-214ENST00000557258 MRGPRGQ86SM5 289 aa15.84■□□□□ 0.13
FOXN3-214ENST00000557258 ZNF251Q9BRH9 671 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms