RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 GPR146Q96CH1 333 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 AIFM2Q9BRQ8 373 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 C7orf69Q9H7B7 122 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 GSKIPQ9P0R6 139 aa19.18■□□□□ 0.66
SIX4-203ENST00000556952 HIVEP2P31629 2446 aa19.17■□□□□ 0.66
SIX4-203ENST00000556952 H7C2Y5 167 aa19.17■□□□□ 0.66
SIX4-203ENST00000556952 HRASP01112 189 aa19.17■□□□□ 0.66
SIX4-203ENST00000556952 CYB5R2Q6BCY4 276 aa19.17■□□□□ 0.66
SIX4-203ENST00000556952 CCDC144NLQ6NUI1 221 aa19.17■□□□□ 0.66
SIX4-203ENST00000556952 NOXA1Q86UR1 476 aa19.17■□□□□ 0.66
SIX4-203ENST00000556952 HYLS1Q96M11 299 aa19.17■□□□□ 0.66
SIX4-203ENST00000556952 CENPVL3A0A0U1RRI6 287 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 A0A1W2PPI3 338 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 PSMB6P28072 239 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 ARHGDIBP52566 201 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 SMCO1Q147U7 214 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 POU2AF1Q16633 256 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 TMEM177Q53S58 311 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 LHFPL4Q7Z7J7 247 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 OR4D5Q8NGN0 318 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 OR4C13Q8NGP0 309 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 ZFP57Q9NU63 452 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 COA4Q9NYJ1 87 aa19.16■□□□□ 0.66
SIX4-203ENST00000556952 FN1P02751 2386 aaKnown RBP19.16■□□□□ 0.66
SIX4-203ENST00000556952 A0A1W2PRD5 423 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 A0A1W2PRF3 423 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 A0A1W2PRM7 423 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 FAM90A9PA6NNJ1 464 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 IGKV1-16P04430 117 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 PET100P0DJ07 73 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 EIF2B2P49770 351 aaKnown RBP19.15■□□□□ 0.66
SIX4-203ENST00000556952 H2BFWTQ7Z2G1 175 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 MOB3BQ86TA1 216 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 DMBX1Q8NFW5 382 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 FLYWCH2Q96CP2 140 aaKnown RBP19.15■□□□□ 0.66
SIX4-203ENST00000556952 NIPBLQ6KC79 2804 aaeCLIP19.15■□□□□ 0.66
SIX4-203ENST00000556952 SETD2Q9BYW2 2564 aaPredicted RBP19.15■□□□□ 0.66
SIX4-203ENST00000556952 ZFHX3Q15911 3703 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 NPFFO15130 113 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 TGFAP01135 160 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 LRRC37A5PQ49AS3 106 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 Q5BKY6 102 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 MALSU1Q96EH3 234 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 CACNG5Q9UF02 275 aa19.15■□□□□ 0.66
SIX4-203ENST00000556952 TRAV14DV4A0A0A6YYC5 116 aa19.14■□□□□ 0.65
SIX4-203ENST00000556952 IGHV1-69DA0A0B4J2H0 117 aa19.14■□□□□ 0.65
SIX4-203ENST00000556952 PITX3O75364 302 aa19.14■□□□□ 0.65
SIX4-203ENST00000556952 MPC2O95563 127 aa19.14■□□□□ 0.65
SIX4-203ENST00000556952 IGHV1-69P01742 117 aa19.14■□□□□ 0.65
SIX4-203ENST00000556952 HABP2Q14520 560 aaPredicted RBP19.14■□□□□ 0.65
SIX4-203ENST00000556952 GPR157Q5UAW9 335 aa19.14■□□□□ 0.65
SIX4-203ENST00000556952 YAE1D1Q9NRH1 226 aa19.14■□□□□ 0.65
SIX4-203ENST00000556952 HILPDAQ9Y5L2 63 aa19.14■□□□□ 0.65
SIX4-203ENST00000556952 TRAV40A0A0B4J280 105 aa19.13■□□□□ 0.65
SIX4-203ENST00000556952 SHOXO15266 292 aa19.13■□□□□ 0.65
SIX4-203ENST00000556952 SAA4P35542 130 aa19.13■□□□□ 0.65
SIX4-203ENST00000556952 RAB32Q13637 225 aa19.13■□□□□ 0.65
SIX4-203ENST00000556952 OR1S1Q8NH92 325 aa19.13■□□□□ 0.65
SIX4-203ENST00000556952 RHOVQ96L33 236 aa19.13■□□□□ 0.65
SIX4-203ENST00000556952 HARBI1Q96MB7 349 aa19.13■□□□□ 0.65
SIX4-203ENST00000556952 NF1P21359 2839 aa19.13■□□□□ 0.65
SIX4-203ENST00000556952 SLC25A4P12235 298 aa19.12■□□□□ 0.65
SIX4-203ENST00000556952 CD1BP29016 333 aa19.12■□□□□ 0.65
SIX4-203ENST00000556952 NKX2-1P43699 371 aaPredicted RBP19.12■□□□□ 0.65
SIX4-203ENST00000556952 SSX2Q16385 188 aa19.12■□□□□ 0.65
SIX4-203ENST00000556952 C11orf87Q6NUJ2 197 aa19.12■□□□□ 0.65
SIX4-203ENST00000556952 Q6ZRM9 215 aa19.12■□□□□ 0.65
SIX4-203ENST00000556952 OR11H4Q8NGC9 324 aa19.12■□□□□ 0.65
SIX4-203ENST00000556952 THAP6Q8TBB0 222 aa19.12■□□□□ 0.65
SIX4-203ENST00000556952 TMEM140Q9NV12 185 aa19.12■□□□□ 0.65
SIX4-203ENST00000556952 TIMM23O14925 209 aa19.11■□□□□ 0.65
SIX4-203ENST00000556952 SCGB1D2O95969 90 aa19.11■□□□□ 0.65
SIX4-203ENST00000556952 S100A10P60903 97 aa19.11■□□□□ 0.65
SIX4-203ENST00000556952 IZUMO4Q1ZYL8 232 aa19.11■□□□□ 0.65
SIX4-203ENST00000556952 CFHR4Q92496 578 aa19.11■□□□□ 0.65
SIX4-203ENST00000556952 MS4A7Q9GZW8 240 aaPredicted RBP19.11■□□□□ 0.65
SIX4-203ENST00000556952 POMT1Q9Y6A1 747 aa19.11■□□□□ 0.65
SIX4-203ENST00000556952 ST8SIA3O43173 380 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 MBPP02686 304 aaPredicted RBP19.1■□□□□ 0.65
SIX4-203ENST00000556952 PRSS54Q6PEW0 395 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 SSX9Q7RTT3 188 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 VKORC1L1Q8N0U8 176 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 PIP4P2Q8N4L2 257 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.1■□□□□ 0.65
SIX4-203ENST00000556952 IGHV3-72A0A0B4J1Y9 119 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 INAFM1C9JVW0 142 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 FAM90A26D6RGX4 464 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 RLN2P04090 185 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 LGALS7P47929 136 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 RPS16P62249 146 aaKnown RBP19.1■□□□□ 0.65
SIX4-203ENST00000556952 OR4A47Q6IF82 309 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 AJUBAQ96IF1 538 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 RNF5Q99942 180 aa19.1■□□□□ 0.65
SIX4-203ENST00000556952 FXYD6-FXYD2A0A087WZ82 144 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 HMSDA8MTL9 139 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 K7EPK0 472 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 SNAPC5O75971 98 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 LYL1P12980 280 aa19.09■□□□□ 0.65
SIX4-203ENST00000556952 NKX2-5P52952 324 aaPredicted RBP19.09■□□□□ 0.65
SIX4-203ENST00000556952 ID3Q02535 119 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms