RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 REEP6Q96HR9 211 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 TMEM56Q96MV1 263 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 RAB40CQ96S21 281 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 NRTNQ99748 197 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 PARLQ9H300 379 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 PATZ1Q9HBE1 687 aaKnown RBP3.13□□□□□ -1.91
FOXN3-213ENST00000556916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.13□□□□□ -1.91
FOXN3-213ENST00000556916 RPRMQ9NS64 109 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 CENPMQ9NSP4 180 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 PLEKHJ1Q9NW61 149 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 RNF115Q9Y4L5 304 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 TIMM9Q9Y5J7 89 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 RFNGQ9Y644 331 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 TMEM56-RWDD3S4R434 201 aa3.13□□□□□ -1.91
FOXN3-213ENST00000556916 C2orf16Q68DN1 1984 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CCL15-CCL14A0A0B4J2E2 113 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 EDDM13A0A1B0GTR0 161 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CTXND1A0A1B0GTU2 59 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 A0A1W2PNV4 684 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 NKX2-6A6NCS4 301 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 GJE1A6NN92 205 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 M0QZ24 198 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CORTO00230 105 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CDIPTO14735 213 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 DEGS1O15121 323 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 MLNRO43193 412 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 SPINT2O43291 252 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CHST1O43916 411 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 SERF1AO75920 110 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CST7O76096 145 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 SERPINA7P05543 415 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 GPX1P07203 203 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 SLC25A6P12236 298 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 GP1BBP13224 206 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CTLA4P16410 223 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CEBPBP17676 345 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 PGCP20142 388 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 VDAC1P21796 283 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 PEBP1P30086 187 aaKnown RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 TSPOP30536 169 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CDKN1AP38936 164 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CAPZBP47756 277 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 LHX2P50458 406 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 DAP3P51398 398 aaKnown RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 PRRX1P54821 245 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 FXYD4P59646 89 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 KRTDAPP60985 99 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 HBG1P69891 147 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 HBG2P69892 147 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 PAX2Q02962 417 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 FMODQ06828 376 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 ZP4Q12836 540 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 ZNF154Q13106 437 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 KIR2DS3Q14952 304 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 OR8B8Q15620 311 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CCL15Q16663 113 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CLEC12BQ2HXU8 276 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 LRRC75BQ2VPJ9 315 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 POM121L1PQ3SYA9 428 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 OR10J3Q5JRS4 329 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 FFAR4Q5NUL3 377 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 FOXL2NBQ6ZUU3 175 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 LHFPL4Q7Z7J7 247 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 RTN4RL2Q86UN3 420 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 TMEM25Q86YD3 366 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 LINC00346Q8IVM7 164 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 SELENOHQ8IZQ5 122 aaKnown RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CA13Q8N1Q1 262 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 METTL27Q8N6F8 245 aaPredicted RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 OR4F5Q8NH21 305 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 OR4S2Q8NH73 311 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 OR51E1Q8TCB6 317 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 MRPL30Q8TCC3 161 aaKnown RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 DOK4Q8TEW6 326 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 SSC4DQ8WTU2 575 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 ABHD3Q8WU67 409 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 BCL2L2Q92843 193 aaPredicted RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 RERGQ96A58 199 aaPredicted RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 BORCS7Q96B45 105 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 SPSB1Q96BD6 273 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 DNAJA3Q96EY1 480 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 VSTM2LQ96N03 204 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 FOXN4Q96NZ1 517 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 OR4F4Q96R69 305 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 TXNDC17Q9BRA2 123 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 TMEM222Q9H0R3 208 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 ZNF286AQ9HBT8 521 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 PHPT1Q9NRX4 125 aaPredicted RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 THAP10Q9P2Z0 257 aaPredicted RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 CLN8Q9UBY8 286 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 NXT1Q9UKK6 140 aaKnown RBP3.12□□□□□ -1.91
FOXN3-213ENST00000556916 POLR1DQ9Y2S0 133 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 PPIAL4AQ9Y536 164 aa3.12□□□□□ -1.91
FOXN3-213ENST00000556916 EML6Q6ZMW3 1958 aa3.11□□□□□ -1.91
FOXN3-213ENST00000556916 IGKV1D-8A0A087WSZ0 117 aa3.11□□□□□ -1.91
FOXN3-213ENST00000556916 LOC101059948A0A1B0GTJ6 334 aa3.11□□□□□ -1.91
FOXN3-213ENST00000556916 A0A1B0GV72 72 aa3.11□□□□□ -1.91
FOXN3-213ENST00000556916 LOC102725191A0A1B0GVB3 256 aa3.11□□□□□ -1.91
FOXN3-213ENST00000556916 A0A1W2PP11 408 aa3.11□□□□□ -1.91
FOXN3-213ENST00000556916 DPRXA6NFQ7 191 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms