RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SRSF9Q13242 221 aaKnown RBP eCLIP4.16□□□□□ -1.74
SRP54-211ENST00000556445 KIR2DS1Q14954 304 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 TAF9Q16594 264 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 ZNF718Q3SXZ3 478 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 TIMM23BQ5SRD1 257 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 Q6ZS49 121 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 SLC25A26Q70HW3 274 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 ZNF767PQ75MW2 155 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 OR4S1Q8NGB4 309 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 OR11H7Q8NGC8 314 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 OR4D10Q8NGI6 311 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 OR2T35Q8NGX2 323 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 OR10K1Q8NGX5 313 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 LYPD6BQ8NI32 183 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 COQ8AQ8NI60 647 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 FAM57AQ8TBR7 257 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 OR5P3Q8WZ94 311 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 CMBLQ96DG6 245 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 MUCL1Q96DR8 90 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 SEC22CQ9BRL7 303 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 BEX2Q9BXY8 128 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 ZNF442Q9H7R0 627 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 PATZ1Q9HBE1 687 aaKnown RBP4.16□□□□□ -1.74
SRP54-211ENST00000556445 BEX1Q9HBH7 125 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 C12orf4Q9NQ89 552 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 ZNF71Q9NQZ8 489 aaPredicted RBP4.16□□□□□ -1.74
SRP54-211ENST00000556445 EHFQ9NZC4 300 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 COMMD9Q9P000 198 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 GLS2Q9UI32 602 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 ELF5Q9UKW6 265 aaPredicted RBP4.16□□□□□ -1.74
SRP54-211ENST00000556445 PRUNE2Q8WUY3 3088 aa4.15□□□□□ -1.74
SRP54-211ENST00000556445 RIF1Q5UIP0 2472 aaKnown RBP4.15□□□□□ -1.74
SRP54-211ENST00000556445 A0A087WZ39 114 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 A0A1B0GUV1 79 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 GOSR2O14653 212 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 ANGPTL7O43827 346 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 LYZL6O75951 148 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 OR7C1O76099 320 aaPredicted RBP4.15□□□□□ -1.75
SRP54-211ENST00000556445 NGFP01138 241 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 CGAP01215 116 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 IFNA7P01567 189 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 PMP2P02689 132 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 CSN2P05814 226 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 CTSDP07339 412 aaPredicted RBP4.15□□□□□ -1.75
SRP54-211ENST00000556445 FCGR3AP08637 254 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 PET100P0DJ07 73 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 PGAM2P15259 253 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 S100A1P23297 94 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 ANOS1P23352 680 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 ZBTB25P24278 435 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 S100GP29377 79 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 CEACAM8P31997 349 aaPredicted RBP4.15□□□□□ -1.75
SRP54-211ENST00000556445 GNG10P50151 68 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 BRWD1-AS2P59051 145 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 UBE2KP61086 200 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 DHODHQ02127 395 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 DHRS2Q13268 280 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 OR8G1Q15617 311 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 Q6ZVQ6 151 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 MOB1BQ7L9L4 216 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 C16orf82Q7Z2V1 217 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 C6orf201Q7Z4U5 140 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 TMED4Q7Z7H5 227 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 LHFPL1Q86WI0 220 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 SGPP2Q8IWX5 399 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 CMTM1Q8IZ96 169 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 KIR3DL3Q8N743 410 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 CCDC71LQ8N9Z2 235 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 ZNF738Q8NE65 137 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 OR8G5Q8NG78 346 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 OR13C8Q8NGS7 320 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 STARD4Q96DR4 205 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 PIK3IP1Q96FE7 263 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 PDCD10Q9BUL8 212 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 TMEM100Q9NV29 134 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 TREM2Q9NZC2 230 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 ANXA10Q9UJ72 324 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 VSIG4Q9Y279 399 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 KCNIP3Q9Y2W7 256 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 HSPB11Q9Y547 144 aa4.15□□□□□ -1.75
SRP54-211ENST00000556445 PTPRZ1P23471 2315 aaPredicted RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 TRBV6-6A0A0A6YYG2 114 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 IGHV2-70DA0A0C4DH43 119 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 IGKV1-12A0A0C4DH73 117 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 A0A0D9SG52 128 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 A0A1B0GW55 424 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 C9orf170A2RU37 121 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 NKX6-3A6NJ46 265 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 RFPL4AA6NLU0 287 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 IFITM10A6NMD0 228 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 SNURFLB1AK76 121 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 RFPL4AL1F8VTS6 287 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 M0R233 179 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 GEMIN2O14893 280 aaKnown RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 NOS1APO75052 506 aaPredicted RBP4.14□□□□□ -1.75
SRP54-211ENST00000556445 TNFSF13O75888 250 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 GAGE7O76087 117 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 SFT2D2O95562 160 aa4.14□□□□□ -1.75
SRP54-211ENST00000556445 IFNA21P01568 189 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms