RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 CMSS1Q9BQ75 279 aaKnown RBP8.03□□□□□ -1.12
SYNE2-221ENST00000556342 OVOL2Q9BRP0 275 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 S100A14Q9HCY8 104 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 SDHAF2Q9NX18 166 aa8.03□□□□□ -1.12
SYNE2-221ENST00000556342 TECRQ9NZ01 308 aaKnown RBP8.03□□□□□ -1.12
SYNE2-221ENST00000556342 NUPR2A6NF83 97 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 CD37P11049 281 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 TMEM50BP56557 158 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 UBE2KP61086 200 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 PRSS8Q16651 343 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 VMA21Q3ZAQ7 101 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 IDO2Q6ZQW0 420 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 SLC16A13Q7RTY0 426 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 TEX45Q8NA69 505 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 SETD9Q8NE22 299 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 OR4A4PQ8NGN8 299 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 CYGBQ8WWM9 190 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 ACOT12Q8WYK0 555 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 GGTLC1Q9BX51 225 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 DMRT1Q9Y5R6 373 aa8.02□□□□□ -1.13
SYNE2-221ENST00000556342 PPP5D1E7EU14 171 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 LGALS9O00182 355 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 BET1O15155 118 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 FABP7O15540 132 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 HLA-AP01891 365 aaKnown RBP8.01□□□□□ -1.13
SYNE2-221ENST00000556342 CD3GP09693 182 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 RRASP10301 218 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 P2RY14Q15391 338 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 C15orf32Q32M92 178 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 HSD17B12Q53GQ0 312 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 FAM209BQ5JX69 171 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 LCE1DQ5T752 114 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 AHSA2Q719I0 299 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 TMEM61Q8N0U2 210 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 MS4A15Q8N5U1 240 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 NANOGP1Q8N7R0 232 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 NECAP1Q8NC96 275 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 CACNG8Q8WXS5 425 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 ARHGAP5-AS1Q96IT6 56 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 SPIN2AQ99865 258 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 SPIN2BQ9BPZ2 258 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 CABLES2Q9BTV7 478 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 PECRQ9BY49 303 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 PSORS1C1Q9UIG5 152 aa8.01□□□□□ -1.13
SYNE2-221ENST00000556342 DNAH10Q8IVF4 4471 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 LOC102724200A0A096LPH7 203 aaPredicted RBP8□□□□□ -1.13
SYNE2-221ENST00000556342 A0A0J9YWU9 116 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 SLC17A2O00624 439 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 GGCTO75223 188 aaKnown RBP8□□□□□ -1.13
SYNE2-221ENST00000556342 OR2J3O76001 311 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 OR2C1O95371 312 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 CRYZL1O95825 349 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 UCHL1P09936 223 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 CBLN1P23435 193 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 EWSR1Q01844 656 aaKnown RBP eCLIP8□□□□□ -1.13
SYNE2-221ENST00000556342 IGSF11Q5DX21 431 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 PLAC9Q5JTB6 97 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 LAIR2Q6ISS4 152 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 CEMP1Q6PRD7 247 aaPredicted RBP8□□□□□ -1.13
SYNE2-221ENST00000556342 CEACAM19Q7Z692 300 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 RPP25LQ8N5L8 163 aaKnown RBP8□□□□□ -1.13
SYNE2-221ENST00000556342 TTC9CQ8N5M4 171 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 OR52B4Q8NGK2 314 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 OR10J5Q8NHC4 309 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 ADTRPQ96IZ2 230 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 ZNF430Q9H8G1 570 aaPredicted RBP8□□□□□ -1.13
SYNE2-221ENST00000556342 PLGRKTQ9HBL7 147 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 SELENOKQ9Y6D0 94 aa8□□□□□ -1.13
SYNE2-221ENST00000556342 TRBV6-7A0A0A0MS04 114 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 TMEM213A2RRL7 107 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 CREBL2O60519 120 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-221ENST00000556342 ACTL6BO94805 426 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 NDUFB8O95169 186 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 DIRAS3O95661 229 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 SAA1P0DJI8 122 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-221ENST00000556342 DUTP33316 252 aaKnown RBP7.99□□□□□ -1.13
SYNE2-221ENST00000556342 TNFRSF9Q07011 255 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 TPBGQ13641 420 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 CDK10Q15131 360 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 C10orf55Q5SWW7 151 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 ZNF57Q68EA5 555 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-221ENST00000556342 GPHB5Q86YW7 130 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 OR56B1Q8NGI3 324 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 OSR1Q8TAX0 266 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-221ENST00000556342 ANAPC16Q96DE5 110 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 GFI1Q99684 422 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 PLCXD1Q9NUJ7 323 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 MLXQ9UH92 298 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 KCNK7Q9Y2U2 307 aa7.99□□□□□ -1.13
SYNE2-221ENST00000556342 RBM7Q9Y580 266 aaKnown RBP7.99□□□□□ -1.13
SYNE2-221ENST00000556342 HECTD4Q9Y4D8 3996 aa7.98□□□□□ -1.13
SYNE2-221ENST00000556342 LINC00473A8K010 186 aa7.98□□□□□ -1.13
SYNE2-221ENST00000556342 A8MWP6 167 aa7.98□□□□□ -1.13
SYNE2-221ENST00000556342 SCAF4O95104 1147 aaKnown RBP7.98□□□□□ -1.13
SYNE2-221ENST00000556342 FCGR3AP08637 254 aa7.98□□□□□ -1.13
SYNE2-221ENST00000556342 GSTT2P0CG29 244 aa7.98□□□□□ -1.13
SYNE2-221ENST00000556342 GSTT2BP0CG30 244 aa7.98□□□□□ -1.13
SYNE2-221ENST00000556342 MRPS15P82914 257 aaKnown RBP7.98□□□□□ -1.13
SYNE2-221ENST00000556342 RAB11BQ15907 218 aa7.98□□□□□ -1.13
SYNE2-221ENST00000556342 ANKRD55Q3KP44 614 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms