RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MRGPRGQ86SM5 289 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 RAB24Q969Q5 203 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 QTRT1Q9BXR0 403 aaKnown RBP12.45□□□□□ -0.42
NEK9-209ENST00000556170 GP6Q9HCN6 339 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 PARD6AQ9NPB6 346 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 PLA2G2EQ9NZK7 142 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 C11orf94C9JXX5 98 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 TRGC2P03986 189 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 RBPJQ06330 500 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 OR5I1Q13606 314 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 ZBTB34Q8NCN2 500 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 NGBQ9NPG2 151 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 CACNA1AO00555 2505 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 IGHV1-18A0A0C4DH31 117 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 SERF2P84101 59 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 SLC35E4Q6ICL7 350 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 OR4S2Q8NH73 311 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 SLC35D1Q9NTN3 355 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 CALYQ9NYX4 217 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 TIMM8BQ9Y5J9 83 aaPredicted RBP12.45□□□□□ -0.42
NEK9-209ENST00000556170 IGHV3-48P01763 117 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 CD1BP29016 333 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 TFF3Q07654 80 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 PLA2G2CQ5R387 149 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 KCNIP4Q6PIL6 250 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 ZNF66Q6ZN08 573 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 Q6ZPA2 131 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 ZNF525Q8N782 197 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 TXN2Q99757 166 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 WDR61Q9GZS3 305 aaKnown RBP12.44□□□□□ -0.42
NEK9-209ENST00000556170 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
NEK9-209ENST00000556170 FAM90A27PA6NNH2 459 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 GALR2O43603 387 aaPredicted RBP12.44□□□□□ -0.42
NEK9-209ENST00000556170 SRP19P09132 144 aaKnown RBP12.44□□□□□ -0.42
NEK9-209ENST00000556170 ARL16Q0P5N6 197 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 FAM216BQ8N7L0 139 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 SAMD10Q9BYL1 202 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 SAP30LQ9HAJ7 183 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 ZNF320A2RRD8 509 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 OR5G3P0C626 314 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 CDX1P47902 265 aaPredicted RBP12.44□□□□□ -0.42
NEK9-209ENST00000556170 C1orf185Q5T7R7 199 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 SLC35E3Q7Z769 313 aa12.44□□□□□ -0.42
NEK9-209ENST00000556170 C16orf97H3BN30 126 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 UBE2CO00762 179 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 DVL1O14640 695 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 HSPB1P04792 205 aaKnown RBP12.43□□□□□ -0.42
NEK9-209ENST00000556170 ARFGEF3Q5TH69 2177 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 UHRF2Q96PU4 802 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 SFTPCP11686 197 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 PTTG1IPP53801 180 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 RPL31P62899 125 aaKnown RBP12.43□□□□□ -0.42
NEK9-209ENST00000556170 MEF2BQ02080 365 aaPredicted RBP12.43□□□□□ -0.42
NEK9-209ENST00000556170 ATP6V1FQ16864 119 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 MIC13Q5XKP0 118 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 IGHV3-72A0A0B4J1Y9 119 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 HRASP01112 189 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 PRB3Q04118 309 aaPredicted RBP12.43□□□□□ -0.42
NEK9-209ENST00000556170 ZNF146Q15072 292 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 DBX2Q6ZNG2 339 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 SPRY4Q9C004 299 aa12.43□□□□□ -0.42
NEK9-209ENST00000556170 MALRD1Q5VYJ5 2156 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 COLCA2A8K830 154 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 GALR1P47211 349 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 HTD2P86397 168 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 RBMXL3Q8N7X1 1067 aaKnown RBP12.42□□□□□ -0.42
NEK9-209ENST00000556170 STARD4Q96DR4 205 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 MISP3Q96FF7 219 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 CLCF1Q9UBD9 225 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 CTXND1A0A1B0GTU2 59 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 A8MXE2 369 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 NDUFB3O43676 98 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 FAM78BQ5VT40 261 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 TRAT1Q6PIZ9 186 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 TMEM18Q96B42 140 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 NEIL1Q96FI4 390 aaPredicted RBP12.42□□□□□ -0.42
NEK9-209ENST00000556170 TMEM140Q9NV12 185 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 LOC102724200A0A096LPH7 203 aaPredicted RBP12.42□□□□□ -0.42
NEK9-209ENST00000556170 hADV38S2A0JD32 116 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 J3QW42 95 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 HPRT1P00492 218 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 ZNF585BQ52M93 769 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 COQ2Q96H96 371 aa12.42□□□□□ -0.42
NEK9-209ENST00000556170 ANKRD11Q6UB99 2663 aaPredicted RBP12.42□□□□□ -0.42
NEK9-209ENST00000556170 A0A1W2PRD5 423 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 A0A1W2PRF3 423 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 A0A1W2PRM7 423 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 RAB7AP51149 207 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 ICAM4Q14773 271 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 C14orf144Q96I85 54 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 CBLN4Q9NTU7 201 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 TNCP24821 2201 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 C20orf202A1L168 122 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 NPY1RP25929 384 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 RPL19P84098 196 aaKnown RBP12.41□□□□□ -0.42
NEK9-209ENST00000556170 LBHQ53QV2 105 aaPredicted RBP12.41□□□□□ -0.42
NEK9-209ENST00000556170 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
NEK9-209ENST00000556170 OR4P4Q8NGL7 312 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms