RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 DUX4Q9UBX2 424 aa9.02□□□□□ -0.97
CHGA-205ENST00000556098 UBQLN2Q9UHD9 624 aa9.02□□□□□ -0.97
CHGA-205ENST00000556098 PLXNB1O43157 2135 aa9.02□□□□□ -0.97
CHGA-205ENST00000556098 A0A087X0M5 115 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 PPIAL4CA0A0B4J2A2 164 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 A0A1B0GX30 115 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 RNF222A6NCQ9 220 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 NKX2-1P43699 371 aaPredicted RBP9.01□□□□□ -0.97
CHGA-205ENST00000556098 THBS3P49746 956 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 AKR1C2P52895 323 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 S100A10P60903 97 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 DHRS7BQ6IAN0 325 aaPredicted RBP9.01□□□□□ -0.97
CHGA-205ENST00000556098 LINC00311Q8N616 119 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 OR8H1Q8NGG4 311 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 OR8B3Q8NGG8 313 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 LHFPL5Q8TAF8 219 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 C8orf46Q8TAG6 207 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 STOML3Q8TAV4 291 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 ZNF596Q8TC21 504 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 LRRC20Q8TCA0 184 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 NEIL1Q96FI4 390 aaPredicted RBP9.01□□□□□ -0.97
CHGA-205ENST00000556098 OR8B2Q96RD0 313 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 S1PR3Q99500 378 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 SSBP3Q9BWW4 388 aaPredicted RBP9.01□□□□□ -0.97
CHGA-205ENST00000556098 HEXA-AS1Q9H8Q6 139 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 SDHAF2Q9NX18 166 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 PSG11Q9UQ72 335 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 BOLA1Q9Y3E2 137 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 RNF114Q9Y508 228 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 MMP24Q9Y5R2 645 aa9.01□□□□□ -0.97
CHGA-205ENST00000556098 WNK1Q9H4A3 2382 aa9□□□□□ -0.97
CHGA-205ENST00000556098 A0A1B0GUS0 222 aa9□□□□□ -0.97
CHGA-205ENST00000556098 CLPSL1A2RUU4 121 aa9□□□□□ -0.97
CHGA-205ENST00000556098 CLDN34H7C241 214 aa9□□□□□ -0.97
CHGA-205ENST00000556098 K7EPK0 472 aa9□□□□□ -0.97
CHGA-205ENST00000556098 DVL1O14640 695 aa9□□□□□ -0.97
CHGA-205ENST00000556098 GPR137BO60478 399 aa9□□□□□ -0.97
CHGA-205ENST00000556098 MED6O75586 246 aa9□□□□□ -0.97
CHGA-205ENST00000556098 HPRT1P00492 218 aa9□□□□□ -0.97
CHGA-205ENST00000556098 RRASP10301 218 aa9□□□□□ -0.97
CHGA-205ENST00000556098 IL3RAP26951 378 aa9□□□□□ -0.97
CHGA-205ENST00000556098 KRTAP10-3P60369 221 aa9□□□□□ -0.97
CHGA-205ENST00000556098 RAB14P61106 215 aa9□□□□□ -0.97
CHGA-205ENST00000556098 EIF5AL1Q6IS14 154 aaKnown RBP9□□□□□ -0.97
CHGA-205ENST00000556098 SLC25A48Q6ZT89 311 aaKnown RBP9□□□□□ -0.97
CHGA-205ENST00000556098 TCF23Q7RTU1 214 aa9□□□□□ -0.97
CHGA-205ENST00000556098 ZNF439Q8NDP4 499 aa9□□□□□ -0.97
CHGA-205ENST00000556098 ZNF680Q8NEM1 530 aa9□□□□□ -0.97
CHGA-205ENST00000556098 TCTEX1D2Q8WW35 142 aa9□□□□□ -0.97
CHGA-205ENST00000556098 RAB40CQ96S21 281 aa9□□□□□ -0.97
CHGA-205ENST00000556098 CITED1Q99966 193 aa9□□□□□ -0.97
CHGA-205ENST00000556098 PCGF1Q9BSM1 259 aa9□□□□□ -0.97
CHGA-205ENST00000556098 RNF126Q9BV68 326 aa9□□□□□ -0.97
CHGA-205ENST00000556098 SLC25A31Q9H0C2 315 aa9□□□□□ -0.97
CHGA-205ENST00000556098 IFI27L2Q9H2X8 130 aa9□□□□□ -0.97
CHGA-205ENST00000556098 PRR13Q9NZ81 148 aa9□□□□□ -0.97
CHGA-205ENST00000556098 C1RLQ9NZP8 487 aa9□□□□□ -0.97
CHGA-205ENST00000556098 MPTX1A8MV57 137 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 WRBO00258 174 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 ST8SIA5O15466 376 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 TNFSF12O43508 249 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 TSC22D2O75157 780 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 PITX3O75364 302 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 MBPP02686 304 aaPredicted RBP8.99□□□□□ -0.97
CHGA-205ENST00000556098 TFF1P04155 84 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 GAPDHP04406 335 aaKnown RBP8.99□□□□□ -0.97
CHGA-205ENST00000556098 TPT1P13693 172 aaKnown RBP8.99□□□□□ -0.97
CHGA-205ENST00000556098 SELLP14151 372 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 DUTP33316 252 aaKnown RBP8.99□□□□□ -0.97
CHGA-205ENST00000556098 TAS2R30P59541 319 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 HOXA4Q00056 320 aaPredicted RBP8.99□□□□□ -0.97
CHGA-205ENST00000556098 RELBQ01201 579 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 ID3Q02535 119 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 BAXQ07812 192 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 OR4S2Q8NH73 311 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 OR1S1Q8NH92 325 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 RFESDQ8TAC1 157 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 SCARB1Q8WTV0 552 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 DCTN5Q9BTE1 182 aa8.99□□□□□ -0.97
CHGA-205ENST00000556098 NOTCH1P46531 2555 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 IGHV3-43A0A0B4J1X8 118 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 IGHV2-70DA0A0C4DH43 119 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 C17orf98A8MV24 154 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 H0YIZ8 118 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 TOR1AO14656 332 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 JTBO76095 146 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 IGHV3-43DP0DP04 118 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 RPL12P30050 165 aaKnown RBP8.98□□□□□ -0.97
CHGA-205ENST00000556098 ZNF137PP52743 207 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 ERVK-16P61578 105 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 VAMP2P63027 116 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 PAX8Q06710 450 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 ZNF585BQ52M93 769 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 CLLU1Q5K131 121 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 C5orf24Q7Z6I8 188 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 SPAG16Q8N0X2 631 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 UBALD1Q8TB05 177 aa8.98□□□□□ -0.97
CHGA-205ENST00000556098 H1FXQ92522 213 aaKnown RBP8.98□□□□□ -0.97
CHGA-205ENST00000556098 PARP12Q9H0J9 701 aaKnown RBP8.98□□□□□ -0.97
CHGA-205ENST00000556098 C19orf12Q9NSK7 152 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms