RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 C10orf111Q8N326 155 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 CIARTQ8N365 385 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-216ENST00000556083 ZIC4Q8N9L1 334 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 SLC25A38Q96DW6 304 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 SLC50A1Q9BRV3 221 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 VCX2Q9H322 139 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 TNS1Q9HBL0 1735 aaKnown RBP9.14□□□□□ -0.95
ACTN1-216ENST00000556083 C9orf172C9J069 976 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 VSIG10L2P0DP72 767 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 FABP2P12104 132 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 FCGR2BP31994 310 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-216ENST00000556083 C2orf68Q2NKX9 166 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 ACP7Q6ZNF0 438 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 CENPVQ7Z7K6 275 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-216ENST00000556083 CYB561D1Q8N8Q1 229 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 NABP2Q9BQ15 211 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 DCTN5Q9BTE1 182 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 CHCHD2Q9Y6H1 151 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-216ENST00000556083 CA2P00918 260 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 SMIM12Q96EX1 92 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 KCNS1Q96KK3 526 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 IMMP1LQ96LU5 166 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 ZNF488Q96MN9 340 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 SIRT4Q9Y6E7 314 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-216ENST00000556083 DUSP14O95147 198 aaKnown RBP9.14□□□□□ -0.95
ACTN1-216ENST00000556083 PF4P02776 101 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
ACTN1-216ENST00000556083 LEMD1Q68G75 181 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 TMEM101Q96IK0 257 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 NPFFR1Q9GZQ6 430 aa9.14□□□□□ -0.95
ACTN1-216ENST00000556083 CENPVL1A0A0U1RR11 272 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 C19orf67A6NJJ6 358 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 NMBP08949 121 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 AGAP20933 346 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 REG1BP48304 166 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 TMEM177Q53S58 311 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 CYP2G1PQ6ZSU1 146 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 APCDD1LQ8NCL9 501 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 DUX5Q96PT3 197 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 HDHD3Q9BSH5 251 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-216ENST00000556083 IFI27L2Q9H2X8 130 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 KBTBD11-OT1A0A1B0GTJ5 212 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 NPIPB7O75200 414 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 MRPL14Q6P1L8 145 aaKnown RBP9.13□□□□□ -0.95
ACTN1-216ENST00000556083 WFDC3Q8IUB2 231 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 DRAM1Q8N682 238 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 REPIN1Q9BWE0 567 aaKnown RBP9.13□□□□□ -0.95
ACTN1-216ENST00000556083 SSBP3Q9BWW4 388 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-216ENST00000556083 GEMIN7Q9H840 131 aaKnown RBP9.13□□□□□ -0.95
ACTN1-216ENST00000556083 H3BRM9 83 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 ZNF506Q5JVG8 444 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 PVRIGQ6DKI7 326 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 ZNF880Q6PDB4 577 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 NEUROG1Q92886 237 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 RNF5Q99942 180 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 LRRC37AA6NMS7 1700 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 GCM2O75603 506 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-216ENST00000556083 NUDT3O95989 172 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 DYRK2Q92630 601 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 AUP1Q9Y679 476 aa9.13□□□□□ -0.95
ACTN1-216ENST00000556083 FOCADQ5VW36 1801 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 ASIPP42127 132 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 SLC25A34Q6PIV7 304 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 ZNF638Q14966 1978 aaKnown RBP9.12□□□□□ -0.95
ACTN1-216ENST00000556083 FAM181BA6NEQ2 426 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 YPEL1O60688 119 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 HBBP68871 147 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 C2orf83Q53S99 150 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 ZNF660Q6AZW8 331 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-216ENST00000556083 YPEL2Q96QA6 119 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 TBX15Q96SF7 602 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 IL36RNQ9UBH0 155 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 TRIP11Q15643 1979 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 C1QTNF9BB2RNN3 333 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 E9PLN8 166 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 CRXO43186 299 aaPredicted RBP9.12□□□□□ -0.95
ACTN1-216ENST00000556083 MOSP00540 346 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 GCHFRP30047 84 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 CDCP2Q5VXM1 449 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 TMEM183AQ8IXX5 376 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 ZNF502Q8TBZ5 544 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 VKORC1Q9BQB6 163 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 SRXN1Q9BYN0 137 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 RAXQ9Y2V3 346 aa9.12□□□□□ -0.95
ACTN1-216ENST00000556083 LOC101059948A0A1B0GTJ6 334 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 IL11P20809 199 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 MIC13Q5XKP0 118 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 C5orf66Q9H5L9 145 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 EFEMP2O95967 443 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 ARF6P62330 175 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 SNAI3Q3KNW1 292 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 LINC00114Q6XXX2 140 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 PNKDQ8N490 385 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 OR1P1Q8NH06 330 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 FAM168AQ92567 244 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 ASCL2Q99929 193 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 C21orf62Q9NYP8 219 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 SEC16AO15027 2179 aa9.11□□□□□ -0.95
ACTN1-216ENST00000556083 LY75O60449 1722 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms