RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 MMP24Q9Y5R2 645 aa9.03□□□□□ -0.96
SHMT2-220ENST00000555634 TMEM56-RWDD3S4R434 201 aa9.03□□□□□ -0.96
SHMT2-220ENST00000555634 OTOGQ6ZRI0 2925 aa9.03□□□□□ -0.96
SHMT2-220ENST00000555634 H3BUX3 64 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 NBR2O15453 112 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 KRASP01116 189 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 SULT1A3P0DMM9 295 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 SULT1A4P0DMN0 295 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 G6PCP35575 357 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 RIPPLY3P57055 190 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 CYCSP99999 105 aaKnown RBP9.02□□□□□ -0.97
SHMT2-220ENST00000555634 ANKRD55Q3KP44 614 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 C1orf229Q6ZS94 237 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-220ENST00000555634 IL17RELQ6ZVW7 336 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 THNSL2Q86YJ6 484 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 OR4A16Q8NH70 328 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 OR1S1Q8NH92 325 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 CFHR4Q92496 578 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 LSM10Q969L4 123 aaKnown RBP9.02□□□□□ -0.97
SHMT2-220ENST00000555634 SSX3Q99909 188 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 MEGF9Q9H1U4 602 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 ZFP57Q9NU63 452 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 MOB4Q9Y3A3 225 aa9.02□□□□□ -0.97
SHMT2-220ENST00000555634 A0A0B4J293 547 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 C13orf42A0A1B0GVH6 325 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 FAM90A9PA6NNJ1 464 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 NCBP2LA6PVI3 153 aaKnown RBP9.01□□□□□ -0.97
SHMT2-220ENST00000555634 WRBO00258 174 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 OR2A4O95047 310 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 IGKV1-16P04430 117 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 HOXB5P09067 269 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 TRAPPC2P0DI81 140 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 TRAPPC2BP0DI82 140 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 UBE2KP61086 200 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 SMCO1Q147U7 214 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 DEFB112Q30KQ8 113 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 SSX9Q7RTT3 188 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 SELENOHQ8IZQ5 122 aaKnown RBP9.01□□□□□ -0.97
SHMT2-220ENST00000555634 C22orf15Q8WYQ4 148 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 OR2A7Q96R45 310 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 TMEM140Q9NV12 185 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 FKBP11Q9NYL4 201 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 METTL1Q9UBP6 276 aaKnown RBP9.01□□□□□ -0.97
SHMT2-220ENST00000555634 PRNDQ9UKY0 176 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 POMT1Q9Y6A1 747 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 ZANQ9Y493 2812 aa9.01□□□□□ -0.97
SHMT2-220ENST00000555634 SLC25A17O43808 307 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 PROP1O75360 226 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 KBTBD11O94819 623 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 SAA1P0DJI8 122 aaPredicted RBP9□□□□□ -0.97
SHMT2-220ENST00000555634 HNF4GQ14541 408 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 POU2AF1Q16633 256 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 IAH1Q2TAA2 248 aaPredicted RBP9□□□□□ -0.97
SHMT2-220ENST00000555634 ARSJQ5FYB0 599 aaPredicted RBP9□□□□□ -0.97
SHMT2-220ENST00000555634 AKAP14Q86UN6 197 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 MMD2Q8IY49 270 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 TMEM86BQ8N661 226 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 TEX45Q8NA69 505 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 OR5M8Q8NGP6 311 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 C17orf50Q8WW18 174 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 EAF1Q96JC9 268 aaPredicted RBP9□□□□□ -0.97
SHMT2-220ENST00000555634 RASL11BQ9BPW5 248 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 SLC25A33Q9BSK2 321 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 COMMD5Q9GZQ3 224 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 RANBP3Q9H6Z4 567 aaPredicted RBP9□□□□□ -0.97
SHMT2-220ENST00000555634 ENY2Q9NPA8 101 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 BET1LQ9NYM9 111 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 PRR13Q9NZ81 148 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 VPREB3Q9UKI3 123 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 TCF19Q9Y242 345 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 NAV3Q8IVL0 2385 aa9□□□□□ -0.97
SHMT2-220ENST00000555634 HIVEP2P31629 2446 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 A0A1B0GU03 582 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 RRHO14718 337 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 MED6O75586 246 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 OR2F2O95006 317 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 SCGB1D2O95969 90 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 FGF2P09038 288 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 SLC25A6P12236 298 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 PVALBP20472 110 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-220ENST00000555634 MAS1LP35410 378 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 FGL1Q08830 312 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 ZNF585BQ52M93 769 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 LDLRAD2Q5SZI1 272 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 GGNBP1Q5YKI7 109 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 OR4A47Q6IF82 309 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 Q6YL49 198 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 LYZL2Q7Z4W2 148 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 CADM3Q8N126 398 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 DYNAPQ8N1N2 210 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 SEC22AQ96IW7 307 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 SMR3AQ99954 134 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-220ENST00000555634 COA4Q9NYJ1 87 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 CACNG5Q9UF02 275 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 TLN2Q9Y4G6 2542 aa8.99□□□□□ -0.97
SHMT2-220ENST00000555634 MDFIC2A0A1B0GVS7 189 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 HMX3A6NHT5 357 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 DBX1A6NMT0 343 aa8.98□□□□□ -0.97
SHMT2-220ENST00000555634 CCSO14618 274 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms