RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 HLA-DMAP28067 261 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 RAB25P57735 213 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 DEFA5Q01523 94 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 CBX3Q13185 183 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 DYRK1AQ13627 763 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 FHL3Q13643 280 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
SNX6-203ENST00000555416 C10orf55Q5SWW7 151 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 DHRS11Q6UWP2 260 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 ZNF818PQ6ZRF7 136 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 TMEM17Q86X19 198 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 TEX45Q8NA69 505 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 OR5T1Q8NG75 326 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 OSR1Q8TAX0 266 aaPredicted RBP10.6□□□□□ -0.71
SNX6-203ENST00000555416 CMTM3Q96MX0 182 aa10.6□□□□□ -0.71
SNX6-203ENST00000555416 ZNF430Q9H8G1 570 aaPredicted RBP10.6□□□□□ -0.71
SNX6-203ENST00000555416 FAM25AB3EWG3 89 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 FAM25CB3EWG5 89 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 FAM25GB3EWG6 89 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 CTDSP2O14595 271 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 RBMXL2O75526 392 aaKnown RBP10.59□□□□□ -0.71
SNX6-203ENST00000555416 IGHV3-11P01762 117 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 GNRHRP30968 328 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 HRH1P35367 487 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 RUNX1Q01196 453 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 TMEM267Q0VDI3 215 aaPredicted RBP10.59□□□□□ -0.71
SNX6-203ENST00000555416 VMA21Q3ZAQ7 101 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 OR11H1Q8NG94 326 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 DCUN1D5Q9BTE7 237 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 FXYD6Q9H0Q3 95 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 AURKAIP1Q9NWT8 199 aaPredicted RBP10.59□□□□□ -0.71
SNX6-203ENST00000555416 VSIG4Q9Y279 399 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 PRELID3BQ9Y3B1 194 aa10.59□□□□□ -0.71
SNX6-203ENST00000555416 SMIM31A0A1B0GVY4 71 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 A0A1B0GW64 132 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 MSGN1A6NI15 193 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 SULT1C2O00338 296 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 MSMO1Q15800 293 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 TNXAQ16473 311 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 MZT2AQ6P582 158 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 ZNF66Q6ZN08 573 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 TCTEX1D1Q8N7M0 179 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 OR1N2Q8NGR9 330 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 OR5H2Q8NGV7 314 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 MOB3AQ96BX8 217 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 ABHD1Q96SE0 405 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 ZNF2Q9BSG1 426 aaPredicted RBP10.58□□□□□ -0.72
SNX6-203ENST00000555416 EXTL2Q9UBQ6 330 aa10.58□□□□□ -0.72
SNX6-203ENST00000555416 E7EUB6 86 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 MYOD1P15172 320 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 RPL5P46777 297 aaKnown RBP10.57□□□□□ -0.72
SNX6-203ENST00000555416 TPPP2P59282 170 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 TAS2R46P59540 309 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 SSX9Q7RTT3 188 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 LAX1Q8IWV1 398 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 PUSL1Q8N0Z8 303 aaKnown RBP10.57□□□□□ -0.72
SNX6-203ENST00000555416 OR5M8Q8NGP6 311 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 OR51H1Q8NH63 302 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 OR52I2Q8NH67 350 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 OR4S2Q8NH73 311 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 DYNC2LI1Q8TCX1 351 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 SRSF12Q8WXF0 261 aaKnown RBP10.57□□□□□ -0.72
SNX6-203ENST00000555416 RHOVQ96L33 236 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 SCPEP1Q9HB40 452 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 KLK11Q9UBX7 282 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 ADAM30Q9UKF2 790 aa10.57□□□□□ -0.72
SNX6-203ENST00000555416 IGHV4OR15-8A0A075B7B6 117 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 A0A087WW49 117 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 M0QYG6 137 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 TRGV3P03979 118 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
SNX6-203ENST00000555416 SLURP1P55000 103 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 TMBIM6P55061 237 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 HERV-K104P61576 105 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 EGFEM1PQ0D2K5 195 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 C19orf35Q6ZS72 473 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 SPAG16Q8N0X2 631 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 POC5Q8NA72 575 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 ZBTB34Q8NCN2 500 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 RAB2BQ8WUD1 216 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 AP3S1Q92572 193 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 ZNF355PQ9NSJ1 428 aa10.56□□□□□ -0.72
SNX6-203ENST00000555416 TRAV3A0A0B4J244 114 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 WI2-2373I1.2A0A1W2PRP0 233 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 HMX3A6NHT5 357 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 TEX22C9J3V5 150 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 H3BMQ9 156 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 K7EIL1 84 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 PGLYRP1O75594 196 aaPredicted RBP10.55□□□□□ -0.72
SNX6-203ENST00000555416 KBTBD11O94819 623 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 OR2A4O95047 310 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 S1PR2O95136 353 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 DUS4LO95620 317 aaKnown RBP10.55□□□□□ -0.72
SNX6-203ENST00000555416 PRH1P02810 166 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 IL6RP08887 468 aaPredicted RBP10.55□□□□□ -0.72
SNX6-203ENST00000555416 RCVRNP35243 200 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 ZNF616Q08AN1 781 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 PYHIN1Q6K0P9 492 aa10.55□□□□□ -0.72
SNX6-203ENST00000555416 ADAD2Q8NCV1 583 aaKnown RBP10.55□□□□□ -0.72
SNX6-203ENST00000555416 TMEM167AQ8TBQ9 72 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms