RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 IGLV1-47P01700 117 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 RLN2P04090 185 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 IGHV4-31P0DP07 118 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 NKX2-1P43699 371 aaPredicted RBP8.25□□□□□ -1.09
NEK9-205ENST00000555405 SRPXP78539 464 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 TPTE2P1Q5T6R2 138 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 PIP4P2Q8N4L2 257 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 OR11H4Q8NGC9 324 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 LINC00574Q9H8X3 128 aa8.25□□□□□ -1.09
NEK9-205ENST00000555405 L7N2F9 121 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 NPFFO15130 113 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 NQO2P16083 231 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 SRP14P37108 136 aaKnown RBP8.24□□□□□ -1.09
NEK9-205ENST00000555405 RAP2BP61225 183 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 VAMP2P63027 116 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 PAX2Q02962 417 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 PJVKQ0ZLH3 352 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 HCP5Q6MZN7 132 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 FBXL15Q9H469 300 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 TMED3Q9Y3Q3 217 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 A0A0U1RQK1 487 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 H0YJW9 148 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 HPRT1P00492 218 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 PSMB6P28072 239 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 FAM120AOSQ5T036 256 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 ZNF546Q86UE3 836 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 BCL6BQ8N143 479 aaPredicted RBP8.24□□□□□ -1.09
NEK9-205ENST00000555405 LRRC75A-AS1Q8N1F1 130 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 ZDHHC16Q969W1 377 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 PLSCR3Q9NRY6 295 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 TMEM140Q9NV12 185 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 MAST4O15021 2626 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 SNRNP70P08621 437 aaKnown RBP8.24□□□□□ -1.09
NEK9-205ENST00000555405 OR9G9P0C7N8 305 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 MMP9P14780 707 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 C10orf55Q5SWW7 151 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 CYB5R2Q6BCY4 276 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 NOXA1Q86UR1 476 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 CD300LFQ8TDQ1 290 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 ADTRPQ96IZ2 230 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 C18orf12Q96KH6 178 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 SPIN2AQ99865 258 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 SPIN2BQ9BPZ2 258 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 OR5AC2Q9NZP5 309 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 RCL1Q9Y2P8 373 aaKnown RBP8.24□□□□□ -1.09
NEK9-205ENST00000555405 WASHC3Q9Y3C0 194 aa8.24□□□□□ -1.09
NEK9-205ENST00000555405 DBX1A6NMT0 343 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 CNIH1O95406 144 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 GIPP09681 153 aaPredicted RBP8.23□□□□□ -1.09
NEK9-205ENST00000555405 GZMKP49863 264 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 UBE2E1P51965 193 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 PAX8Q06710 450 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 LOXL1Q08397 574 aaPredicted RBP8.23□□□□□ -1.09
NEK9-205ENST00000555405 MSMO1Q15800 293 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 TMEM30BQ3MIR4 351 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 TMEM217Q8N7C4 229 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 TPSG1Q9NRR2 321 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 TRAV20A0A0B4J274 112 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 A8MXK9 166 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 CHST1O43916 411 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 HRASP01112 189 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 MBPP02686 304 aaPredicted RBP8.23□□□□□ -1.09
NEK9-205ENST00000555405 ZNF833PQ6ZTB9 187 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 TMEM56Q96MV1 263 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 TMEM56-RWDD3S4R434 201 aa8.23□□□□□ -1.09
NEK9-205ENST00000555405 IGHV1-69DA0A0B4J2H0 117 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 ST8SIA3O43173 380 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 MPC2O95563 127 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 IGHV1-69P01742 117 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 SAA1P0DJI8 122 aaPredicted RBP8.22□□□□□ -1.09
NEK9-205ENST00000555405 CYCSP99999 105 aaKnown RBP8.22□□□□□ -1.09
NEK9-205ENST00000555405 SPANXN5Q5MJ07 72 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 KRTAP1-3Q8IUG1 177 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.22□□□□□ -1.09
NEK9-205ENST00000555405 QTRT1Q9BXR0 403 aaKnown RBP8.22□□□□□ -1.09
NEK9-205ENST00000555405 HIVEP1P15822 2718 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 CST7O76096 145 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 ATG12O94817 140 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 NUP62P37198 522 aaPredicted RBP8.22□□□□□ -1.09
NEK9-205ENST00000555405 TNXAQ16473 311 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 OR4A47Q6IF82 309 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 BEND2Q8NDZ0 799 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 OR4C13Q8NGP0 309 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 ST6GALNAC6Q969X2 333 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 FAM103A1Q9BTL3 118 aaKnown RBP8.22□□□□□ -1.09
NEK9-205ENST00000555405 MFFQ9GZY8 342 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 TOLLIPQ9H0E2 274 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 ARL6Q9H0F7 186 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 HEYLQ9NQ87 328 aaPredicted RBP8.22□□□□□ -1.09
NEK9-205ENST00000555405 METTL1Q9UBP6 276 aaKnown RBP8.22□□□□□ -1.09
NEK9-205ENST00000555405 FAM24AA6NFZ4 105 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 F2RL1P55085 397 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 LINC00311Q8N616 119 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 INO80EQ8NBZ0 244 aaPredicted RBP8.22□□□□□ -1.09
NEK9-205ENST00000555405 OR11H6Q8NGC7 330 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 MXRA5Q9NR99 2828 aa8.22□□□□□ -1.09
NEK9-205ENST00000555405 REG1AP05451 166 aa8.21□□□□□ -1.09
NEK9-205ENST00000555405 TRAPPC2P0DI81 140 aa8.21□□□□□ -1.09
NEK9-205ENST00000555405 TRAPPC2BP0DI82 140 aa8.21□□□□□ -1.09
NEK9-205ENST00000555405 TMEM11P17152 192 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms