RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 C12orf74Q32Q52 190 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 IBA57Q5T440 356 aaKnown RBP2.89□□□□□ -1.95
SCFD1-211ENST00000554437 TOMM20LQ6UXN7 152 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 OSR2Q8N2R0 312 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 KRTCAP2Q8N6L1 136 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 UBALD1Q8TB05 177 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 FRZBQ92765 325 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 GPR146Q96CH1 333 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 NARS2Q96I59 477 aaKnown RBP2.89□□□□□ -1.95
SCFD1-211ENST00000554437 MIA2Q96PC5 1412 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 NMNAT3Q96T66 252 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 TMEM70Q9BUB7 260 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 SCRT1Q9BWW7 348 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 RSPO3Q9BXY4 272 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-211ENST00000554437 CCDC90BQ9GZT6 254 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 TMEM222Q9H0R3 208 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 LRTM1Q9HBL6 345 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 TMEM138Q9NPI0 162 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 C21orf62Q9NYP8 219 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 ZNRD1Q9P1U0 126 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 A0A1W2PRE2 83 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 E7EQ34 232 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 AIPO00170 330 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 PPP1CCP36873 323 aaKnown RBP2.88□□□□□ -1.95
SCFD1-211ENST00000554437 KRTAP10-1P60331 282 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 SPCS2Q15005 226 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 PDGFRLQ15198 375 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 GRK1Q15835 563 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 BRMS1LQ5PSV4 323 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF678Q5SXM1 525 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 SLC22A24Q8N4F4 322 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 FER1L6-AS1Q8NA97 138 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 OR4A5Q8NH83 315 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 MAL2Q969L2 176 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 DNAJC30Q96LL9 226 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 GPR82Q96P67 336 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 TSC22D3Q99576 134 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 GPR84Q9NQS5 396 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 TAAR3PQ9P1P4 343 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 AK3Q9UIJ7 227 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF222Q9UK12 451 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 TMEM14AQ9Y6G1 99 aa2.88□□□□□ -1.95
SCFD1-211ENST00000554437 ROBO3Q96MS0 1386 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 LINC00862A6NCI5 91 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 OR5H14A6NHG9 310 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 SLC17A3O00476 420 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 COX7A2LO14548 114 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF682O95780 498 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 HLA-DQB1P01920 261 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 LGALS1P09382 135 aaKnown RBP2.87□□□□□ -1.95
SCFD1-211ENST00000554437 CD28P10747 220 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 IL1RNP18510 177 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 GZMHP20718 246 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 CXCL12P48061 93 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 SRP9P49458 86 aaKnown RBP2.87□□□□□ -1.95
SCFD1-211ENST00000554437 ELF3P78545 371 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-211ENST00000554437 HOXC5Q00444 222 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 MOBPQ13875 183 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 CST6Q15828 149 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 DEFB115Q30KQ5 88 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 KLHL12Q53G59 568 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 Q6ZR03 302 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF664Q8N3J9 261 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 ST6GALNAC3Q8NDV1 305 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 CIRBP-AS1Q8TBR5 109 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 GPR119Q8TDV5 335 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 ITLN2Q8WWU7 325 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-211ENST00000554437 RTN4IP1Q8WWV3 396 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-211ENST00000554437 CMBLQ96DG6 245 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 RMI2Q96E14 147 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 SHANK2-AS3Q9BTD1 123 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 EFCAB11Q9BUY7 163 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 TSSK6Q9BXA6 273 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF286AQ9HBT8 521 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 SLC23A2Q9UGH3 650 aa2.87□□□□□ -1.95
SCFD1-211ENST00000554437 MRPS16Q9Y3D3 137 aaKnown RBP2.87□□□□□ -1.95
SCFD1-211ENST00000554437 SETD5Q9C0A6 1442 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 IGHV3OR15-7A0A075B7D8 119 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 IGHV3-43A0A0B4J1X8 118 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 IGHV1-3A0A0C4DH29 117 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 IZUMO1RA6ND01 250 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 SIGLEC16A6NMB1 481 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 K7ERS5 55 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 LST1O00453 97 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 GYPCP04921 128 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 RBP1P09455 135 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 CD7P09564 240 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 PPIBP23284 216 aaKnown RBP2.86□□□□□ -1.95
SCFD1-211ENST00000554437 OPRM1P35372 400 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 CDC42P60953 191 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 RHEBQ15382 184 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 GLT8D1Q68CQ7 371 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 ZFP1Q6P2D0 407 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 UNQ9165/PRO28630Q6UXU0 137 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 OR13C8Q8NGS7 320 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 OR5J2Q8NH18 312 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 LINC01560Q8TB33 94 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 RAB2BQ8WUD1 216 aa2.86□□□□□ -1.95
SCFD1-211ENST00000554437 SLC25A46Q96AG3 418 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms