RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 BRS3P32247 399 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 G6PCP35575 357 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 DYNLT3P51808 116 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 SMCO1Q147U7 214 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 ZFP69Q49AA0 526 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 H2BFWTQ7Z2G1 175 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 MOB3BQ86TA1 216 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 FOXRED2Q8IWF2 684 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 PDZD9Q8IXQ8 264 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 MAPK1IP1LQ8NDC0 245 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 DMBX1Q8NFW5 382 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 OR4D5Q8NGN0 318 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 VSTM2AQ8TAG5 236 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 PPP1R1CQ8WVI7 109 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 CFHR4Q92496 578 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 AJUBAQ96IF1 538 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 CHIAQ9BZP6 476 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 MS4A7Q9GZW8 240 aaPredicted RBP6.17□□□□□ -1.42
TDP1-209ENST00000554180 BET1LQ9NYM9 111 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 NAV3Q8IVL0 2385 aa6.17□□□□□ -1.42
TDP1-209ENST00000554180 G3V3Q6 166 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 PITX3O75364 302 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 VENTXO95231 258 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 MPC2O95563 127 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 FSHBP01225 129 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 HNRNPCP07910 306 aaKnown RBP eCLIP6.16□□□□□ -1.42
TDP1-209ENST00000554180 IGHV4-38-2P0DP08 117 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 PSMB6P28072 239 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 NKX2-1P43699 371 aaPredicted RBP6.16□□□□□ -1.42
TDP1-209ENST00000554180 UBE2KP61086 200 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 CD300CQ08708 224 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 EBI3Q14213 229 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 SSX2Q16385 188 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 AANATQ16613 207 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 VMA21Q3ZAQ7 101 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 KLF17Q5JT82 389 aaPredicted RBP6.16□□□□□ -1.42
TDP1-209ENST00000554180 OR4A47Q6IF82 309 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 C9orf139Q6ZV77 190 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 ZNF429Q86V71 674 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 THNSL2Q86YJ6 484 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 PUSL1Q8N0Z8 303 aaKnown RBP6.16□□□□□ -1.42
TDP1-209ENST00000554180 OR4A5Q8NH83 315 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 OR1S1Q8NH92 325 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 GPR146Q96CH1 333 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 HYLS1Q96M11 299 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 TSNAXQ99598 290 aaKnown RBP6.16□□□□□ -1.42
TDP1-209ENST00000554180 MEGF9Q9H1U4 602 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.16□□□□□ -1.42
TDP1-209ENST00000554180 TMEM140Q9NV12 185 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 GSKIPQ9P0R6 139 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 CACNG5Q9UF02 275 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 HILPDAQ9Y5L2 63 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 CR1P17927 2039 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 ACANP16112 2415 aa6.16□□□□□ -1.42
TDP1-209ENST00000554180 OTOGQ6ZRI0 2925 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 IGHV3-72A0A0B4J1Y9 119 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 A0A1W2PRD5 423 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 A0A1W2PRF3 423 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 A0A1W2PRM7 423 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 C15orf61A6NNL5 157 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 HMSDA8MTL9 139 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 ST8SIA3O43173 380 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 CD5LO43866 347 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 DEDDO75618 318 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 KBTBD11O94819 623 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 LY86O95711 162 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 MOSP00540 346 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 AVPP01185 164 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 IGLV2-23P01705 113 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 MBPP02686 304 aaPredicted RBP6.15□□□□□ -1.42
TDP1-209ENST00000554180 RLN2P04090 185 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 IL6RP08887 468 aaPredicted RBP6.15□□□□□ -1.42
TDP1-209ENST00000554180 FBP1P09467 338 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 SAA1P0DJI8 122 aaPredicted RBP6.15□□□□□ -1.42
TDP1-209ENST00000554180 SLC25A4P12235 298 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 LYL1P12980 280 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 RPS16P62249 146 aaKnown RBP6.15□□□□□ -1.42
TDP1-209ENST00000554180 ID3Q02535 119 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 RAB32Q13637 225 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 PDLIM3Q53GG5 364 aaPredicted RBP6.15□□□□□ -1.42
TDP1-209ENST00000554180 C11orf87Q6NUJ2 197 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 Q6ZRM9 215 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 NOXA1Q86UR1 476 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 DYNAPQ8N1N2 210 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 CIARTQ8N365 385 aaPredicted RBP6.15□□□□□ -1.42
TDP1-209ENST00000554180 TEX45Q8NA69 505 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 OR8H1Q8NGG4 311 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 OR2T10Q8NGZ9 312 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 OR52E5Q8NH55 327 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 THAP6Q8TBB0 222 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 NANPQ8TBE9 248 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 TMEM167AQ8TBQ9 72 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 TMEM14BQ9NUH8 114 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 FKBP11Q9NYL4 201 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 HSPB7Q9UBY9 170 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 NUP50Q9UKX7 468 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 PRNDQ9UKY0 176 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 FOXA2Q9Y261 457 aaPredicted RBP6.15□□□□□ -1.42
TDP1-209ENST00000554180 FAM96BQ9Y3D0 163 aa6.15□□□□□ -1.42
TDP1-209ENST00000554180 POMT1Q9Y6A1 747 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms