RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 NRN1LQ496H8 165 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 TMEM52BQ4KMG9 183 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 CXCL17Q6UXB2 119 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 FA2HQ7L5A8 372 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 FLVCR1-AS1Q8TAF5 88 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 NEU4Q8WWR8 484 aaPredicted RBP8.01□□□□□ -1.13
SIX4-202ENST00000554079 TXNDC17Q9BRA2 123 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 CACNG5Q9UF02 275 aa8.01□□□□□ -1.13
SIX4-202ENST00000554079 EXPH5Q8NEV8 1989 aa8□□□□□ -1.13
SIX4-202ENST00000554079 A6NDN8 102 aa8□□□□□ -1.13
SIX4-202ENST00000554079 PRR19A6NJB7 356 aa8□□□□□ -1.13
SIX4-202ENST00000554079 C17orf51A8MQB3 221 aa8□□□□□ -1.13
SIX4-202ENST00000554079 MS4A18H0YCH9 400 aa8□□□□□ -1.13
SIX4-202ENST00000554079 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8□□□□□ -1.13
SIX4-202ENST00000554079 SYS1-DBNDD2H3BUS1 97 aa8□□□□□ -1.13
SIX4-202ENST00000554079 PRKNO60260 465 aaPredicted RBP8□□□□□ -1.13
SIX4-202ENST00000554079 COX8AP10176 69 aa8□□□□□ -1.13
SIX4-202ENST00000554079 IGFBP2P18065 325 aa8□□□□□ -1.13
SIX4-202ENST00000554079 CD38P28907 300 aa8□□□□□ -1.13
SIX4-202ENST00000554079 KIR3DS1Q14943 382 aa8□□□□□ -1.13
SIX4-202ENST00000554079 MS4A18Q3C1V0 323 aa8□□□□□ -1.13
SIX4-202ENST00000554079 SPANXN5Q5MJ07 72 aa8□□□□□ -1.13
SIX4-202ENST00000554079 ADAMTSL5Q6ZMM2 481 aa8□□□□□ -1.13
SIX4-202ENST00000554079 CRIPAKQ8N1N5 446 aa8□□□□□ -1.13
SIX4-202ENST00000554079 ZNF418Q8TF45 676 aaPredicted RBP8□□□□□ -1.13
SIX4-202ENST00000554079 URB1-AS1Q96HZ7 61 aa8□□□□□ -1.13
SIX4-202ENST00000554079 PMCHL2Q9BQD1 86 aa8□□□□□ -1.13
SIX4-202ENST00000554079 DUSP23Q9BVJ7 150 aa8□□□□□ -1.13
SIX4-202ENST00000554079 TMEM147Q9BVK8 224 aa8□□□□□ -1.13
SIX4-202ENST00000554079 SPANXB1Q9NS25 103 aaPredicted RBP8□□□□□ -1.13
SIX4-202ENST00000554079 KCNIP1Q9NZI2 227 aa8□□□□□ -1.13
SIX4-202ENST00000554079 ZNF391Q9UJN7 358 aa8□□□□□ -1.13
SIX4-202ENST00000554079 TNFRSF18Q9Y5U5 241 aa8□□□□□ -1.13
SIX4-202ENST00000554079 CACNA1IQ9P0X4 2223 aa8□□□□□ -1.13
SIX4-202ENST00000554079 TLX3O43711 291 aaPredicted RBP8□□□□□ -1.13
SIX4-202ENST00000554079 ANGPTL7O43827 346 aa8□□□□□ -1.13
SIX4-202ENST00000554079 PGLYRP1O75594 196 aaPredicted RBP8□□□□□ -1.13
SIX4-202ENST00000554079 TUSC2O75896 110 aa8□□□□□ -1.13
SIX4-202ENST00000554079 UTS2O95399 124 aa8□□□□□ -1.13
SIX4-202ENST00000554079 IGKV1-39P01597 117 aa8□□□□□ -1.13
SIX4-202ENST00000554079 IGKV1D-39P04432 117 aa8□□□□□ -1.13
SIX4-202ENST00000554079 ZNF585BQ52M93 769 aa8□□□□□ -1.13
SIX4-202ENST00000554079 Q6ZSR3 168 aa8□□□□□ -1.13
SIX4-202ENST00000554079 SPACA3Q8IXA5 215 aa8□□□□□ -1.13
SIX4-202ENST00000554079 TSTD1Q8NFU3 115 aa8□□□□□ -1.13
SIX4-202ENST00000554079 OR1L1Q8NH94 360 aa8□□□□□ -1.13
SIX4-202ENST00000554079 RAB1CQ92928 201 aa8□□□□□ -1.13
SIX4-202ENST00000554079 NPCDR1Q9BY65 106 aa8□□□□□ -1.13
SIX4-202ENST00000554079 CCL28Q9NRJ3 127 aa8□□□□□ -1.13
SIX4-202ENST00000554079 COPS7AQ9UBW8 275 aa8□□□□□ -1.13
SIX4-202ENST00000554079 COL5A1P20908 1838 aaPredicted RBP7.99□□□□□ -1.13
SIX4-202ENST00000554079 TMED7-TICAM2A0A0A6YYA0 188 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 NPIPA5E9PKD4 350 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 CLPSP04118 112 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 ADH5P11766 374 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 CCL2P13500 99 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 SSBP2P81877 361 aaPredicted RBP7.99□□□□□ -1.13
SIX4-202ENST00000554079 ZNF718Q3SXZ3 478 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 TMEM211Q6ICI0 200 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 RNASEKQ6P5S7 137 aaKnown RBP7.99□□□□□ -1.13
SIX4-202ENST00000554079 LINC00173Q6ZV60 143 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 BPIFA4PQ86YQ2 179 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 TPRX1Q8N7U7 411 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 PP6455Q8WZ26 134 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 C11orf52Q96A22 123 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 RNF183Q96D59 192 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 TMEM191AQ9H0A3 160 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 CRISPLD2Q9H0B8 497 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 NPIPA1Q9UND3 350 aa7.99□□□□□ -1.13
SIX4-202ENST00000554079 NPIPB13A6NJU9 1138 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 CD300LBA8K4G0 201 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 PMS2P5A8MQ11 134 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 NPIPB4C9JG80 1138 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 CLDN14O95500 239 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 IGKV1-5P01602 117 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 SP9P0CG40 484 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 CYBAP13498 195 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 F2RP25116 425 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 DAP3P51398 398 aaKnown RBP7.98□□□□□ -1.13
SIX4-202ENST00000554079 SLC35B1P78383 322 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 PIGYQ3MUY2 71 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 Q6ZS49 121 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 SHISA6Q6ZSJ9 500 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 Q8N7P7 452 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 OR2T6Q8NHC8 308 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 VWCEQ96DN2 955 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 GPR82Q96P67 336 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 TIMM29Q9BSF4 260 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 OR2D2Q9H210 308 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 SERTAD4Q9NUC0 356 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 HIF1ANQ9NWT6 349 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 MED29Q9NX70 200 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 ERG28Q9UKR5 140 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 TRGV10A0A0A0MS01 117 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 SMIM27A0A1W2PRY6 76 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 SH2D7A6NKC9 451 aaPredicted RBP7.98□□□□□ -1.13
SIX4-202ENST00000554079 H0YGG7 62 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 ISLRO14498 428 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 TNFSF14O43557 240 aa7.98□□□□□ -1.13
SIX4-202ENST00000554079 SPRY1O43609 319 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms