RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DYNAPQ8N1N2 210 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 OR4A5Q8NH83 315 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 C17orf50Q8WW18 174 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 SSMEM1Q8WWF3 244 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 PRDM13Q9H4Q3 707 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 MMP24Q9Y5R2 645 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 ZANQ9Y493 2812 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 DBX1A6NMT0 343 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 M0QZK8 103 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 SLC25A6P12236 298 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 UBE2KP61086 200 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 MMDQ15546 238 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 DEFB112Q30KQ8 113 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 TMEM86BQ8N661 226 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 UXS1Q8NBZ7 420 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 EAF1Q96JC9 268 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-210ENST00000553950 RHOVQ96L33 236 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 SSX3Q99909 188 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 BET1LQ9NYM9 111 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 POMT1Q9Y6A1 747 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 MAST4O15021 2626 aa11.65□□□□□ -0.54
SHMT2-210ENST00000553950 NBR2O15453 112 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 HLA-GP17693 338 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 BRWD1-AS2P59051 145 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 GSG1LQ6UXU4 331 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 OR5M8Q8NGP6 311 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 LHFPL5Q8TAF8 219 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 SEC22AQ96IW7 307 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 COA4Q9NYJ1 87 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 TCF19Q9Y242 345 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 MOB4Q9Y3A3 225 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 TEX15Q9BXT5 2789 aa11.64□□□□□ -0.55
SHMT2-210ENST00000553950 A0A1B0GU03 582 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 H3BUX3 64 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 GOSR2O14653 212 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 SNAPC5O75971 98 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 OR2F2O95006 317 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 OR2A4O95047 310 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 NDUFA3O95167 84 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 KRASP01116 189 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 IGKV1-39P01597 117 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 IGKV1D-39P04432 117 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 SAA1P0DJI8 122 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-210ENST00000553950 G6PCP35575 357 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 LINC00205P59089 165 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 CYCSP99999 105 aaKnown RBP11.63□□□□□ -0.55
SHMT2-210ENST00000553950 PLGLAQ15195 96 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 NMSQ5H8A3 153 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 Q6YL49 198 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 FOXRED2Q8IWF2 684 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 Q8N6K4 173 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 TEX45Q8NA69 505 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 NPBQ8NG41 125 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 ZNF418Q8TF45 676 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-210ENST00000553950 OR2A7Q96R45 310 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 JMJD8Q96S16 334 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 SMR3AQ99954 134 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 PDCD10Q9BUL8 212 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 MGAT4CQ9UBM8 478 aa11.63□□□□□ -0.55
SHMT2-210ENST00000553950 F8P00451 2351 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 C5orf51A6NDU8 294 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 RRHO14718 337 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 FGF16O43320 207 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 KBTBD11O94819 623 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 HOXB5P09067 269 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 SULT1A3P0DMM9 295 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 SULT1A4P0DMN0 295 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 SMCO1Q147U7 214 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 TUSC1Q2TAM9 212 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 GGNBP1Q5YKI7 109 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 OR4A47Q6IF82 309 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 LYZL2Q7Z4W2 148 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 PUSL1Q8N0Z8 303 aaKnown RBP11.62□□□□□ -0.55
SHMT2-210ENST00000553950 BCL6BQ8N143 479 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-210ENST00000553950 ZFP57Q9NU63 452 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 PRR13Q9NZ81 148 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 VPREB3Q9UKI3 123 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 PRNDQ9UKY0 176 aa11.62□□□□□ -0.55
SHMT2-210ENST00000553950 SONP18583 2426 aaKnown RBP11.62□□□□□ -0.55
SHMT2-210ENST00000553950 SLC25A17O43808 307 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 RBMXL2O75526 392 aaKnown RBP11.61□□□□□ -0.55
SHMT2-210ENST00000553950 ACTL6BO94805 426 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 IGKV1-5P01602 117 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 P0C879 139 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 MAS1LP35410 378 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 IER3P46695 156 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 SSX9Q7RTT3 188 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 MRPL41Q8IXM3 137 aaKnown RBP11.61□□□□□ -0.55
SHMT2-210ENST00000553950 MMD2Q8IY49 270 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 OR4A16Q8NH70 328 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 TMEM167AQ8TBQ9 72 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 CHAC2Q8WUX2 184 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 C22orf15Q8WYQ4 148 aa11.61□□□□□ -0.55
SHMT2-210ENST00000553950 RBM14Q96PK6 669 aaKnown RBP11.61□□□□□ -0.55
SHMT2-210ENST00000553950 SLC25A33Q9BSK2 321 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms