RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 C5orf30Q96GV9 206 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 GINS4Q9BRT9 223 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 C8orf4Q9NR00 106 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 PLCXD1Q9NUJ7 323 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 ZNF257Q9Y2Q1 563 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 HECTD4Q9Y4D8 3996 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 PCLOQ9Y6V0 5065 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 A0A0J9YWU9 116 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 DPPA5A6NC42 116 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 DUTP33316 252 aaKnown RBP10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 ARL3P36405 182 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 TNFRSF9Q07011 255 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 PLAC9Q5JTB6 97 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 BPIFB6Q8NFQ5 453 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 CACNG8Q8WXS5 425 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 CENPOQ9BU64 300 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 DMRT1Q9Y5R6 373 aa10.62□□□□□ -0.71
CHMP1A-210ENST00000551981 ZNF320A2RRD8 509 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 CDK1P06493 297 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 FCGR3AP08637 254 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 GSTT2P0CG29 244 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 GSTT2BP0CG30 244 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 SAA1P0DJI8 122 aaPredicted RBP10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 BMI1P35226 326 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 APOC4P55056 127 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 OR4A47Q6IF82 309 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 LYG2Q86SG7 212 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 WFDC3Q8IUB2 231 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 PACRGLQ8N7B6 248 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 DCUN1D5Q9BTE7 237 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 MLXQ9UH92 298 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 FBXL7Q9UJT9 491 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 TP53TG1Q9Y2A0 90 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 SELENOKQ9Y6D0 94 aa10.61□□□□□ -0.71
CHMP1A-210ENST00000551981 LINC00473A8K010 186 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 A8MWP6 167 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 DENRO43583 198 aaKnown RBP10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 SCAF4O95104 1147 aaKnown RBP10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 DHFRP00374 187 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 C10orf55Q5SWW7 151 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 LAIR2Q6ISS4 152 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 RBPMS2Q6ZRY4 209 aaKnown RBP10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 Q6ZWC4 215 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 TMEM217Q8N7C4 229 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 UXS1Q8NBZ7 420 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 FAM3DQ96BQ1 224 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 RAB3CQ96E17 227 aa10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 MRPS7Q9Y2R9 242 aaKnown RBP10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 AK6Q9Y3D8 172 aaKnown RBP10.6□□□□□ -0.71
CHMP1A-210ENST00000551981 TRAV25A0A0B4J276 109 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 TMEM213A2RRL7 107 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 NPIPB5A8MRT5 1133 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 SPRY2O43597 315 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 ARL6IP5O75915 188 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 ATF4P18848 351 aaPredicted RBP10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 CLDN12P56749 244 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 SPHARQ15513 63 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 MED22Q15528 200 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 TM4SF20Q53R12 229 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 CLEC19AQ6UXS0 136 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 RPP25LQ8N5L8 163 aaKnown RBP10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 OR1L6Q8NGR2 347 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 VSTM2AQ8TAG5 236 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 UFD1Q92890 307 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 MARC2Q969Z3 335 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 EEF1AKMT3Q96AZ1 226 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 GFI1Q99684 422 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 FKBP14Q9NWM8 211 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 PRELID3BQ9Y3B1 194 aa10.59□□□□□ -0.71
CHMP1A-210ENST00000551981 HMX3A6NHT5 357 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 TEX22C9J3V5 150 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 UBE2CO00762 179 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 FCGR3BO75015 233 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 IGHV3-23P01764 117 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 GNAO1P09471 354 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 GADD45AP24522 165 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 TALDO1P37837 337 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 TRAM1Q15629 374 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 C2orf76Q3KRA6 126 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 LIPKQ5VXJ0 399 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 BTNL8Q6UX41 500 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 KCTD9Q7L273 389 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 H1FOOQ8IZA3 346 aaPredicted RBP10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 SLC38A6Q8IZM9 456 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 FBLIM1Q8WUP2 373 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 MAFIPQ8WZ33 124 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 TMEM203Q969S6 136 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 CCDC140Q96MF4 163 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 FYTTD1Q96QD9 318 aaKnown RBP10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 OR51E2Q9H255 320 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 RAB22AQ9UL26 194 aa10.58□□□□□ -0.72
CHMP1A-210ENST00000551981 A0A075B6Q4 140 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 KBTBD11O94819 623 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 HIST1H1BP16401 226 aaKnown RBP10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 CD36P16671 472 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 MAS1LP35410 378 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 RPL27AP46776 148 aaKnown RBP10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 PSMD7P51665 324 aa10.57□□□□□ -0.72
CHMP1A-210ENST00000551981 EWSR1Q01844 656 aaKnown RBP eCLIP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms