RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 CFAP53Q96M91 514 aa0.95□□□□□ -2.26
SCAF11-215ENST00000551391 RETNLBQ9BQ08 111 aa0.95□□□□□ -2.26
SCAF11-215ENST00000551391 DOHHQ9BU89 302 aa0.95□□□□□ -2.26
SCAF11-215ENST00000551391 TMEM109Q9BVC6 243 aa0.95□□□□□ -2.26
SCAF11-215ENST00000551391 TTTY13Q9BZ97 58 aa0.95□□□□□ -2.26
SCAF11-215ENST00000551391 IMP3Q9NV31 184 aaKnown RBP0.95□□□□□ -2.26
SCAF11-215ENST00000551391 FLG2Q5D862 2391 aaPredicted RBP0.94□□□□□ -2.26
SCAF11-215ENST00000551391 TMED7-TICAM2A0A0A6YYA0 188 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 A0A0J9YW62 118 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 SERPINA7P05543 415 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 CD40LGP29965 261 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 TPI1P60174 286 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 JOSD1Q15040 202 aaPredicted RBP0.94□□□□□ -2.26
SCAF11-215ENST00000551391 PLEKHG7Q6ZR37 379 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 KTN1-AS1Q86SY8 53 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 Q8N402 240 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 CCL13Q99616 98 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 HSPB9Q9BQS6 159 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 C7orf50Q9BRJ6 194 aaKnown RBP0.94□□□□□ -2.26
SCAF11-215ENST00000551391 DERL2Q9GZP9 239 aa0.94□□□□□ -2.26
SCAF11-215ENST00000551391 ZNHIT6Q9NWK9 470 aaKnown RBP0.94□□□□□ -2.26
SCAF11-215ENST00000551391 SDK1Q7Z5N4 2213 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 NAV1Q8NEY1 1877 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 ZNF737O75373 536 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 LYNX1P0DP58 116 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 GPX2P18283 190 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 CDC34P49427 236 aaPredicted RBP0.93□□□□□ -2.26
SCAF11-215ENST00000551391 UBE2G2P60604 165 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 AKR1C1Q04828 323 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 LRRC75BQ2VPJ9 315 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 SBSNQ6UWP8 590 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 NAA40Q86UY6 237 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 UBL4BQ8N7F7 174 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 HAVCR2Q8TDQ0 301 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 RAB2BQ8WUD1 216 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 DNAJB3Q8WWF6 145 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 XAGE1AQ9HD64 81 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 CFAP45Q9UL16 551 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 RBM7Q9Y580 266 aaKnown RBP0.93□□□□□ -2.26
SCAF11-215ENST00000551391 TIMM9Q9Y5J7 89 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 SIPA1L1O43166 1804 aa0.93□□□□□ -2.26
SCAF11-215ENST00000551391 TRAV7A0A075B6U4 112 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 IGHV1-18A0A0C4DH31 117 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 F5H768 121 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 H7C2G1 150 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 ITGB1BP1O14713 200 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 CIAO1O76071 339 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 HLA-DRAP01903 254 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 UGT2B7P16662 529 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 ALDH3A1P30838 453 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 CCR2P41597 374 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 AKR1C3P42330 323 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 SLCO1A2P46721 670 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 KRTAP10-4P60372 401 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-215ENST00000551391 HIST1H4AP62805 103 aaKnown RBP0.92□□□□□ -2.26
SCAF11-215ENST00000551391 MED21Q13503 144 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 TMEM155Q4W5P6 130 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 TNFAIP8L2Q6P589 184 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-215ENST00000551391 RASSF6Q6ZTQ3 369 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 DYNAPQ8N1N2 210 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 TMEM251Q8N6I4 163 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 PACRGLQ8N7B6 248 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 EEF1AKMT1Q8WVE0 214 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 GNPNAT1Q96EK6 184 aaPredicted RBP0.92□□□□□ -2.26
SCAF11-215ENST00000551391 KCTD7Q96MP8 289 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 PLEKHJ1Q9NW61 149 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 POLR1DQ9Y2S0 133 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 NUMA1Q14980 2115 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 KIAA2026Q5HYC2 2103 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 KIF15Q9NS87 1388 aa0.92□□□□□ -2.26
SCAF11-215ENST00000551391 CUL9Q8IWT3 2517 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 SMARCA4P51532 1647 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 HMSDA8MTL9 139 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 COX7A2LO14548 114 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 CREBL2O60519 120 aaPredicted RBP0.91□□□□□ -2.26
SCAF11-215ENST00000551391 IL3P08700 152 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 LGALS1P09382 135 aaKnown RBP0.91□□□□□ -2.26
SCAF11-215ENST00000551391 CD151P48509 253 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 SKP1P63208 163 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 NNATQ16517 81 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 ACSM3Q53FZ2 586 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 SAPCD1Q5SSQ6 148 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 FAM78BQ5VT40 261 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 UNQ6190/PRO20217Q6UXQ8 127 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 ZNF705AQ6ZN79 300 aaPredicted RBP0.91□□□□□ -2.26
SCAF11-215ENST00000551391 FAM9CQ8IZT9 166 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 C10orf105Q8TEF2 133 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 TMA16Q96EY4 203 aaKnown RBP0.91□□□□□ -2.26
SCAF11-215ENST00000551391 IMMP2LQ96T52 175 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 HRASLSQ9HDD0 168 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 RTTNQ86VV8 2226 aa0.91□□□□□ -2.26
SCAF11-215ENST00000551391 TRBV6-5A0A0K0K1A5 114 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 LINC00854A0A1B0GVQ3 168 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 DISC1C4P0D8 188 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 GOLGA8KD6RF30 607 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 GOLGA8MH3BSY2 632 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 COCHO43405 550 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 C8orf88P0DMB2 117 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 CCL5P13501 91 aa0.9□□□□□ -2.27
SCAF11-215ENST00000551391 RPL28P46779 137 aaKnown RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms