RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MYCNOSP40205 109 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 TMEM33P57088 247 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 PPP1CAP62136 330 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
CPSF6-206ENST00000550987 RPL18AQ02543 176 aaKnown RBP3.52□□□□□ -1.85
CPSF6-206ENST00000550987 PRKCDQ05655 676 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 CEMP1Q6PRD7 247 aaPredicted RBP3.52□□□□□ -1.85
CPSF6-206ENST00000550987 IDO2Q6ZQW0 420 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 NIT1Q86X76 327 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 DHFR2Q86XF0 187 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 NATD1Q8N6N6 113 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 OR1M1Q8NGA1 313 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 SFXN5Q8TD22 340 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 TESCQ96BS2 214 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 C12orf43Q96C57 262 aaKnown RBP3.52□□□□□ -1.85
CPSF6-206ENST00000550987 ZHX1-C8orf76Q96EF9 292 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 SFRP2Q96HF1 295 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 TSNAXQ99598 290 aaKnown RBP3.52□□□□□ -1.85
CPSF6-206ENST00000550987 ZNF430Q9H8G1 570 aaPredicted RBP3.52□□□□□ -1.85
CPSF6-206ENST00000550987 SNX24Q9Y343 169 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 NDUFAF1Q9Y375 327 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 NUBP2Q9Y5Y2 271 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 ANKRD36A6QL64 1941 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 NUP210LQ5VU65 1888 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 WNK2Q9Y3S1 2297 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 IGLV1-50A0A075B6I6 118 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 TRAV8-7A0A075B6U6 113 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 IGHV3OR16-9A0A0B4J2B5 98 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 A0A0B4J2E0 115 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 A0A1B0GX12 115 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 K7EN84 100 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 UBFD1O14562 309 aaKnown RBP3.51□□□□□ -1.85
CPSF6-206ENST00000550987 CDIPTO14735 213 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 SYNGR1O43759 233 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 KLF7O75840 302 aaPredicted RBP3.51□□□□□ -1.85
CPSF6-206ENST00000550987 SOD1P00441 154 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 STATHP02808 62 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 HIST1H1EP10412 219 aaKnown RBP3.51□□□□□ -1.85
CPSF6-206ENST00000550987 PSMA1P25786 263 aaKnown RBP3.51□□□□□ -1.85
CPSF6-206ENST00000550987 MPIP34949 423 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 RPA3P35244 121 aaPredicted RBP3.51□□□□□ -1.85
CPSF6-206ENST00000550987 TTPAP49638 278 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 NDUFA8P51970 172 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 RAB8AP61006 207 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 RANP62826 216 aaKnown RBP3.51□□□□□ -1.85
CPSF6-206ENST00000550987 RPL31P62899 125 aaKnown RBP3.51□□□□□ -1.85
CPSF6-206ENST00000550987 BTN3A2P78410 334 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 CPTPQ5TA50 214 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 TSPO2Q5TGU0 170 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 TMEM42Q69YG0 159 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 CA13Q8N1Q1 262 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 STX19Q8N4C7 294 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 ZNF561Q8N587 486 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 OR5W2Q8NH69 310 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 PTX4Q96A99 478 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 C18orf15Q96N68 181 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 OR2A5Q96R48 311 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 HOPXQ9BPY8 73 aaPredicted RBP3.51□□□□□ -1.85
CPSF6-206ENST00000550987 CHAC1Q9BUX1 264 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 TMEM109Q9BVC6 243 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 HMG20AQ9NP66 347 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 GLTPQ9NZD2 209 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 OR52A1Q9UKL2 312 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 WSB1Q9Y6I7 421 aa3.51□□□□□ -1.85
CPSF6-206ENST00000550987 OR11H12B2RN74 326 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 PANO1I0J062 215 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 BHLHE40O14503 412 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 UGT2B11O75310 529 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 UPK1BO75841 260 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 CCNKO75909 580 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 LIMS3P0CW19 117 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 LIMS4P0CW20 117 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 IFI30P13284 250 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 UGT2B7P16662 529 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 SULT1A1P50225 295 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 SULT1A2P50226 295 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 RAB25P57735 213 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 ESRRGP62508 458 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 RPL23P62829 140 aaKnown RBP3.5□□□□□ -1.85
CPSF6-206ENST00000550987 TSNQ15631 228 aaKnown RBP3.5□□□□□ -1.85
CPSF6-206ENST00000550987 CEACAM21Q3KPI0 293 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 AVPI1Q5T686 147 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 SAXO2Q658L1 398 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 ELP2Q6IA86 826 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 MED27Q6P2C8 311 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 IGFL2Q6UWQ7 119 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 CYHR1Q6ZMK1 362 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 LINC01551Q86U37 167 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 MDP1Q86V88 176 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 OR11H1Q8NG94 326 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 OR10X1Q8NGY0 326 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 OR6K3Q8NGY3 331 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 OR11H2Q8NH07 326 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 OR10A6Q8NH74 314 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 RAB8BQ92930 207 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 IMP4Q96G21 291 aaKnown RBP3.5□□□□□ -1.85
CPSF6-206ENST00000550987 ZNF799Q96GE5 643 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 COX14Q96I36 57 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 BTF3L4Q96K17 158 aa3.5□□□□□ -1.85
CPSF6-206ENST00000550987 IP6K3Q96PC2 410 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms