RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 VDAC1P21796 283 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 PAX6P26367 422 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 BRS3P32247 399 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 C2orf68Q2NKX9 166 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 GGNBP1Q5YKI7 109 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 OR11H7Q8NGC8 314 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
CACNB3-216ENST00000550391 LSM10Q969L4 123 aaKnown RBP11.35□□□□□ -0.59
CACNB3-216ENST00000550391 R3HDM4Q96D70 268 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 MEGF9Q9H1U4 602 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
CACNB3-216ENST00000550391 A0A0U1RQK1 487 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 C5orf51A6NDU8 294 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 CCSO14618 274 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 SHOXO15266 292 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 VENTXO95231 258 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 KRASP01116 189 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 IGKV1-5P01602 117 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 IGKV1-16P04430 117 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 NQO2P16083 231 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 CXCL3P19876 107 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 AKR1C2P52895 323 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 ERVK-16P61578 105 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
CACNB3-216ENST00000550391 TMEM177Q53S58 311 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 GSG1LQ6UXU4 331 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 OR5M8Q8NGP6 311 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 RNASE11Q8TAA1 199 aaKnown RBP11.34□□□□□ -0.59
CACNB3-216ENST00000550391 RBMXL1Q96E39 390 aaKnown RBP11.34□□□□□ -0.59
CACNB3-216ENST00000550391 RRNAD1Q96FB5 475 aaKnown RBP11.34□□□□□ -0.59
CACNB3-216ENST00000550391 SEC22AQ96IW7 307 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 RNF5Q99942 180 aa11.34□□□□□ -0.59
CACNB3-216ENST00000550391 MS4A7Q9GZW8 240 aaPredicted RBP11.34□□□□□ -0.59
CACNB3-216ENST00000550391 C13orf42A0A1B0GVH6 325 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 FAM90A9PA6NNJ1 464 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 FAM25EA8MYX2 175 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 SIX6O95475 246 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 FBP1P09467 338 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 G6PCP35575 357 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 LGALS7P47929 136 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 POU2AF1Q16633 256 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 NMSQ5H8A3 153 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 THNSL2Q86YJ6 484 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 FAM219AQ8IW50 185 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 GPR146Q96CH1 333 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 HARBI1Q96MB7 349 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 ZNF436Q9C0F3 470 aaPredicted RBP11.33□□□□□ -0.6
CACNB3-216ENST00000550391 MMP24Q9Y5R2 645 aa11.33□□□□□ -0.6
CACNB3-216ENST00000550391 SOX21Q9Y651 276 aaPredicted RBP11.33□□□□□ -0.6
CACNB3-216ENST00000550391 MARCH11A6NNE9 402 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 CCNKO75909 580 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 MOSP00540 346 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 FAM106CPP0CH98 169 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 SLC25A6P12236 298 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 DYNLT3P51808 116 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 H2BFSP57053 126 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 FAM120AOSQ5T036 256 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 H2BFWTQ7Z2G1 175 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 AKAP14Q86UN6 197 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 DMBX1Q8NFW5 382 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 OR2T10Q8NGZ9 312 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 ASB13Q8WXK3 278 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 RHOVQ96L33 236 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 TSNAXQ99598 290 aaKnown RBP11.32□□□□□ -0.6
CACNB3-216ENST00000550391 SPIN2AQ99865 258 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 SPIN2BQ9BPZ2 258 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 TMEM160Q9NX00 188 aa11.32□□□□□ -0.6
CACNB3-216ENST00000550391 A0A1B0GU03 582 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
CACNB3-216ENST00000550391 MPTX1A8MV57 137 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 PFDN1O60925 122 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 OR2A4O95047 310 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 IGKV1D-33P01593 117 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 IGKV1-33P01594 117 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 SNRNP70P08621 437 aaKnown RBP11.31□□□□□ -0.6
CACNB3-216ENST00000550391 GIPP09681 153 aaPredicted RBP11.31□□□□□ -0.6
CACNB3-216ENST00000550391 P0C879 139 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 HNF1AP20823 631 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 CYCSP99999 105 aaKnown RBP11.31□□□□□ -0.6
CACNB3-216ENST00000550391 CD83Q01151 205 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 SRSF4Q08170 494 aaKnown RBP11.31□□□□□ -0.6
CACNB3-216ENST00000550391 EBI3Q14213 229 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 AANATQ16613 207 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 IAH1Q2TAA2 248 aaPredicted RBP11.31□□□□□ -0.6
CACNB3-216ENST00000550391 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
CACNB3-216ENST00000550391 SSX9Q7RTT3 188 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 VKORC1L1Q8N0U8 176 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 BCL6BQ8N143 479 aaPredicted RBP11.31□□□□□ -0.6
CACNB3-216ENST00000550391 EAF1Q96JC9 268 aaPredicted RBP11.31□□□□□ -0.6
CACNB3-216ENST00000550391 OR10C1Q96KK4 312 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 OR2A7Q96R45 310 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 PDCD10Q9BUL8 212 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 CHIAQ9BZP6 476 aa11.31□□□□□ -0.6
CACNB3-216ENST00000550391 A0A0G2JRQ6 117 aa11.3□□□□□ -0.6
CACNB3-216ENST00000550391 CD24P25063 80 aa11.3□□□□□ -0.6
CACNB3-216ENST00000550391 SRP14P37108 136 aaKnown RBP11.3□□□□□ -0.6
CACNB3-216ENST00000550391 UBE2KP61086 200 aa11.3□□□□□ -0.6
CACNB3-216ENST00000550391 HES1Q14469 280 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms