RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 PNMA8CA0A1B0GUJ8 204 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 IGHV3-23P01764 117 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 IDO2Q6ZQW0 420 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 GPHB5Q86YW7 130 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 NKAIN3Q8N8D7 197 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 NECAP1Q8NC96 275 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 TMEM59Q9BXS4 323 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 RDH8Q9NYR8 311 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 UBQLN2Q9UHD9 624 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 CLEC2DQ9UHP7 191 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 AK3Q9UIJ7 227 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 EXOSC1Q9Y3B2 195 aaKnown RBP7.76□□□□□ -1.17
VPS29-208ENST00000550267 S4R3C0 116 aa7.76□□□□□ -1.17
VPS29-208ENST00000550267 FAT2Q9NYQ8 4349 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 DYNC1H1Q14204 4646 aaKnown RBP7.75□□□□□ -1.17
VPS29-208ENST00000550267 ZNF320A2RRD8 509 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 UBE2CO00762 179 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 UBBP0CG47 229 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 DCKP27707 260 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 ARL3P36405 182 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 NANOS2P60321 138 aaKnown RBP7.75□□□□□ -1.17
VPS29-208ENST00000550267 UBE2KP61086 200 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 CBX3Q13185 183 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 UNC119Q13432 240 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 VMA21Q3ZAQ7 101 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 C10orf55Q5SWW7 151 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 C19orf35Q6ZS72 473 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 CBR4Q8N4T8 237 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 TTC9CQ8N5M4 171 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 TEX45Q8NA69 505 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.75□□□□□ -1.17
VPS29-208ENST00000550267 OR1L6Q8NGR2 347 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 PYDC1Q8WXC3 89 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 C5orf30Q96GV9 206 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 TM2D1Q9BX74 207 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 OR2D2Q9H210 308 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 RIMS4Q9H426 269 aaPredicted RBP7.75□□□□□ -1.17
VPS29-208ENST00000550267 Q9N2K0 584 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 PLEKHJ1Q9NW61 149 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 SDHAF2Q9NX18 166 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 FBXL17Q9UF56 701 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 DNAH2Q9P225 4427 aa7.75□□□□□ -1.17
VPS29-208ENST00000550267 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 LOC100130705A0A1B0GUX0 176 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 A0A1B0GVY2 172 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 A8MWP6 167 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 SOCS1O15524 211 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 WBP4O75554 376 aaKnown RBP7.74□□□□□ -1.17
VPS29-208ENST00000550267 CD3GP09693 182 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 CTRB1P17538 263 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 MYL12AP19105 171 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 RTL8BQ17RB0 113 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 FAM106AQ4KMX7 169 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 FAM209BQ5JX69 171 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 CTRB2Q6GPI1 263 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 CLEC19AQ6UXS0 136 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 RBPMS2Q6ZRY4 209 aaKnown RBP7.74□□□□□ -1.17
VPS29-208ENST00000550267 STPG3Q8N7X2 389 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 GGHQ92820 318 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 CCDC140Q96MF4 163 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 ZNF430Q9H8G1 570 aaPredicted RBP7.74□□□□□ -1.17
VPS29-208ENST00000550267 PRR13Q9NZ81 148 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 FBXL7Q9UJT9 491 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 MGAT4AQ9UM21 535 aa7.74□□□□□ -1.17
VPS29-208ENST00000550267 TRAV25A0A0B4J276 109 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 KIR2DL5BA0A0G2JN68 375 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 KIR2DL5BA0A0G2JPC4 375 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 HMX3A6NHT5 357 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 CRYZL1O95825 349 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 RPL35AP18077 110 aaKnown RBP7.73□□□□□ -1.17
VPS29-208ENST00000550267 FCGR2BP31994 310 aaPredicted RBP7.73□□□□□ -1.17
VPS29-208ENST00000550267 RBMS2Q15434 407 aaKnown RBP7.73□□□□□ -1.17
VPS29-208ENST00000550267 OR4A47Q6IF82 309 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 UNQ9165/PRO28630Q6UXU0 137 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 CEACAM19Q7Z692 300 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 KIR2DL5AQ8N109 375 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 OR2C3Q8N628 320 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 ZNF485Q8NCK3 441 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 KIR2DL5BQ8NHK3 375 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 SPIN2AQ99865 258 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 SPIN2BQ9BPZ2 258 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 AP5S1Q9NUS5 200 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 DIMT1Q9UNQ2 313 aaKnown RBP7.73□□□□□ -1.17
VPS29-208ENST00000550267 DNAH11Q96DT5 4516 aa7.73□□□□□ -1.17
VPS29-208ENST00000550267 TMEM14DPA8MWL7 114 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 TRDCB7Z8K6 153 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 TEX22C9J3V5 150 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 BET1O15155 118 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 XRCC3O43542 346 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 ACTL6BO94805 426 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 S1PR2O95136 353 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 IFNA4P05014 189 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 SAA1P0DJI8 122 aaPredicted RBP7.72□□□□□ -1.17
VPS29-208ENST00000550267 RRASP10301 218 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 SRMP19623 302 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 MAP2K4P45985 399 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 QRFPP83859 136 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 INSL4Q14641 139 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 ZNF585BQ52M93 769 aa7.72□□□□□ -1.17
VPS29-208ENST00000550267 C1orf100Q5SVJ3 147 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms