RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 GGNBP1Q5YKI7 109 aa23.1■■□□□ 1.29
BRF1-213ENST00000548421 OR11H7Q8NGC8 314 aa23.1■■□□□ 1.29
BRF1-213ENST00000548421 OR5M8Q8NGP6 311 aa23.1■■□□□ 1.29
BRF1-213ENST00000548421 LSM10Q969L4 123 aaKnown RBP23.1■■□□□ 1.29
BRF1-213ENST00000548421 RRNAD1Q96FB5 475 aaKnown RBP23.1■■□□□ 1.29
BRF1-213ENST00000548421 MXRA5Q9NR99 2828 aa23.1■■□□□ 1.29
BRF1-213ENST00000548421 ZFHX3Q15911 3703 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 MOSP00540 346 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 TRAPPC2P0DI81 140 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 TRAPPC2BP0DI82 140 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 CD24P25063 80 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 SRP14P37108 136 aaKnown RBP23.09■■□□□ 1.29
BRF1-213ENST00000548421 CLEC9AQ6UXN8 241 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 THNSL2Q86YJ6 484 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 DMBX1Q8NFW5 382 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 OR2T10Q8NGZ9 312 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 CHAC2Q8WUX2 184 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 C22orf15Q8WYQ4 148 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 RNF5Q99942 180 aa23.09■■□□□ 1.29
BRF1-213ENST00000548421 ANK3Q12955 4377 aaKnown RBP23.08■■□□□ 1.29
BRF1-213ENST00000548421 FAM106CPP0CH98 169 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 CXCL3P19876 107 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 LGALS7P47929 136 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 EBI3Q14213 229 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 HES1Q14469 280 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 POU2AF1Q16633 256 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 LRRC75BQ2VPJ9 315 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 DEFB112Q30KQ8 113 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 NMSQ5H8A3 153 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 VKORC1L1Q8N0U8 176 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 RHOVQ96L33 236 aa23.08■■□□□ 1.29
BRF1-213ENST00000548421 SRRM4A7MD48 611 aaKnown RBP23.07■■□□□ 1.28
BRF1-213ENST00000548421 FAM25EA8MYX2 175 aa23.07■■□□□ 1.28
BRF1-213ENST00000548421 AANATQ16613 207 aa23.07■■□□□ 1.28
BRF1-213ENST00000548421 SSX9Q7RTT3 188 aa23.07■■□□□ 1.28
BRF1-213ENST00000548421 FAM219AQ8IW50 185 aa23.07■■□□□ 1.28
BRF1-213ENST00000548421 EAF1Q96JC9 268 aaPredicted RBP23.07■■□□□ 1.28
BRF1-213ENST00000548421 RITA1Q96K30 269 aa23.07■■□□□ 1.28
BRF1-213ENST00000548421 MMP24Q9Y5R2 645 aa23.07■■□□□ 1.28
BRF1-213ENST00000548421 A0A0G2JRQ6 117 aa23.06■■□□□ 1.28
BRF1-213ENST00000548421 GSG1LQ6UXU4 331 aa23.06■■□□□ 1.28
BRF1-213ENST00000548421 H2BFWTQ7Z2G1 175 aa23.06■■□□□ 1.28
BRF1-213ENST00000548421 TSNAXQ99598 290 aaKnown RBP23.06■■□□□ 1.28
BRF1-213ENST00000548421 SSX3Q99909 188 aa23.06■■□□□ 1.28
BRF1-213ENST00000548421 MDFIC2A0A1B0GVS7 189 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 C5orf51A6NDU8 294 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 MPTX1A8MV57 137 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 P0C879 139 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 LURAP1LQ8IV03 231 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 TMEM140Q9NV12 185 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 C13orf42A0A1B0GVH6 325 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 SIX6O95475 246 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 IGLV2-23P01705 113 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 H2BFSP57053 126 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 HNF4GQ14541 408 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 OR4A47Q6IF82 309 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 GPR146Q96CH1 333 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 SPIN2AQ99865 258 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 SPIN2BQ9BPZ2 258 aa23.05■■□□□ 1.28
BRF1-213ENST00000548421 HIVEP2P31629 2446 aa23.04■■□□□ 1.28
BRF1-213ENST00000548421 SAA1P0DJI8 122 aaPredicted RBP23.04■■□□□ 1.28
BRF1-213ENST00000548421 TMEM11P17152 192 aa23.04■■□□□ 1.28
BRF1-213ENST00000548421 VMA21Q3ZAQ7 101 aa23.04■■□□□ 1.28
BRF1-213ENST00000548421 FBLN7Q53RD9 439 aa23.04■■□□□ 1.28
BRF1-213ENST00000548421 Q8N6K4 173 aa23.04■■□□□ 1.28
BRF1-213ENST00000548421 OR10C1Q96KK4 312 aa23.04■■□□□ 1.28
BRF1-213ENST00000548421 UBE2KP61086 200 aa23.03■■□□□ 1.28
BRF1-213ENST00000548421 VSTM2AQ8TAG5 236 aa23.03■■□□□ 1.28
BRF1-213ENST00000548421 PIFOQ8TCI5 191 aa23.03■■□□□ 1.28
BRF1-213ENST00000548421 PDCD10Q9BUL8 212 aa23.03■■□□□ 1.28
BRF1-213ENST00000548421 ZNF436Q9C0F3 470 aaPredicted RBP23.03■■□□□ 1.28
BRF1-213ENST00000548421 SPDEFO95238 335 aa23.02■■□□□ 1.28
BRF1-213ENST00000548421 SLC25A6P12236 298 aa23.02■■□□□ 1.28
BRF1-213ENST00000548421 CNTFRP26992 372 aa23.02■■□□□ 1.28
BRF1-213ENST00000548421 MMDQ15546 238 aa23.02■■□□□ 1.28
BRF1-213ENST00000548421 IZUMO4Q1ZYL8 232 aa23.02■■□□□ 1.28
BRF1-213ENST00000548421 IAH1Q2TAA2 248 aaPredicted RBP23.02■■□□□ 1.28
BRF1-213ENST00000548421 THOC7Q6I9Y2 204 aaKnown RBP23.02■■□□□ 1.28
BRF1-213ENST00000548421 PUSL1Q8N0Z8 303 aaKnown RBP23.02■■□□□ 1.28
BRF1-213ENST00000548421 BET1LQ9NYM9 111 aa23.02■■□□□ 1.28
BRF1-213ENST00000548421 A0A1B0GU03 582 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 H3BUX3 64 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 SLC25A17O43808 307 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 OR2A4O95047 310 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 PSG5Q15238 335 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 ZDHHC16Q969W1 377 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 C2orf50Q96LR7 162 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 ZNF48Q96MX3 618 aaPredicted RBP23.01■■□□□ 1.27
BRF1-213ENST00000548421 OR2A7Q96R45 310 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 PRDM13Q9H4Q3 707 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 RANBP3Q9H6Z4 567 aaPredicted RBP23.01■■□□□ 1.27
BRF1-213ENST00000548421 CACNG5Q9UF02 275 aa23.01■■□□□ 1.27
BRF1-213ENST00000548421 NBR2O15453 112 aa23■■□□□ 1.27
BRF1-213ENST00000548421 SMCO1Q147U7 214 aa23■■□□□ 1.27
BRF1-213ENST00000548421 Q6ZRM9 215 aa23■■□□□ 1.27
BRF1-213ENST00000548421 NPBQ8NG41 125 aa23■■□□□ 1.27
BRF1-213ENST00000548421 CHIAQ9BZP6 476 aa23■■□□□ 1.27
BRF1-213ENST00000548421 CDC42EP3Q9UKI2 254 aa23■■□□□ 1.27
BRF1-213ENST00000548421 KBTBD11O94819 623 aa22.99■■□□□ 1.27
BRF1-213ENST00000548421 IL6RP08887 468 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms