RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ACTBL2Q562R1 376 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 UNQ5815/PRO19632Q6UWF5 114 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 LYSMD2Q8IV50 215 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 LFNGQ8NES3 379 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 OR5H2Q8NGV7 314 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 OR4S2Q8NH73 311 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 ABHD5Q8WTS1 349 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 SECTM1Q8WVN6 248 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 BORCS5Q969J3 196 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 MOB3AQ96BX8 217 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 FAM103A1Q9BTL3 118 aaKnown RBP9.24□□□□□ -0.93
YBX3-217ENST00000546164 SLC5A7Q9GZV3 580 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 TAS2R8Q9NYW2 309 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 EHFQ9NZC4 300 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 VSIG4Q9Y279 399 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 A3GALT2U3KPV4 340 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 H3BUA1 57 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 I3L521 148 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 CREBL2O60519 120 aaPredicted RBP9.23□□□□□ -0.93
YBX3-217ENST00000546164 CNIH1O95406 144 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 BRI3O95415 125 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 SAA1P0DJI8 122 aaPredicted RBP9.23□□□□□ -0.93
YBX3-217ENST00000546164 IGLL1P15814 213 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 RCVRNP35243 200 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 RFX2P48378 723 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 HERV-K104P61576 105 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 SNX29P2Q8IUI4 249 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 GRPEL2Q8TAA5 225 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 C15orf40Q8WUR7 153 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 TCTEX1D2Q8WW35 142 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 MCRIP2Q9BUT9 160 aaKnown RBP9.23□□□□□ -0.93
YBX3-217ENST00000546164 GPR61Q9BZJ8 451 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 SLA2Q9H6Q3 261 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 GNB4Q9HAV0 340 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 CCDC59Q9P031 241 aaKnown RBP9.23□□□□□ -0.93
YBX3-217ENST00000546164 TGP01266 2768 aa9.23□□□□□ -0.93
YBX3-217ENST00000546164 FAM25AB3EWG3 89 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 FAM25CB3EWG5 89 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 FAM25GB3EWG6 89 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 PMP2P02689 132 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 CD40LGP29965 261 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 GNRHRP30968 328 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 HRH1P35367 487 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 FXYD4P59646 89 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 GNB1P62873 340 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 CATR1Q13166 79 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 DEFB136Q30KP8 78 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 OR2B11Q5JQS5 317 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 VAX1Q5SQQ9 334 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 ASPHD1Q5U4P2 390 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 ZNF818PQ6ZRF7 136 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 REC114Q7Z4M0 266 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 TMEM17Q86X19 198 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 MMD2Q8IY49 270 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 POC5Q8NA72 575 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 OR6F1Q8NGZ6 308 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 VSTM2AQ8TAG5 236 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 DYNC2LI1Q8TCX1 351 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 ZNF2Q9BSG1 426 aaPredicted RBP9.22□□□□□ -0.93
YBX3-217ENST00000546164 DCUN1D5Q9BTE7 237 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 MIXL1Q9H2W2 232 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 EXTL2Q9UBQ6 330 aa9.22□□□□□ -0.93
YBX3-217ENST00000546164 TNFSF12O43508 249 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 HRASP01112 189 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 HLA-DMAP28067 261 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 FOXB2Q5VYV0 432 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 IDO2Q6ZQW0 420 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 SPAG16Q8N0X2 631 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 PUSL1Q8N0Z8 303 aaKnown RBP9.21□□□□□ -0.94
YBX3-217ENST00000546164 OR11H1Q8NG94 326 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 TMEM167AQ8TBQ9 72 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 CD300LFQ8TDQ1 290 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 SRSF12Q8WXF0 261 aaKnown RBP9.21□□□□□ -0.94
YBX3-217ENST00000546164 RHOVQ96L33 236 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 DUX3Q96PT4 197 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 GPHA2Q96T91 129 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 AIFM2Q9BRQ8 373 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 FXYD6Q9H0Q3 95 aa9.21□□□□□ -0.94
YBX3-217ENST00000546164 ZNF430Q9H8G1 570 aaPredicted RBP9.21□□□□□ -0.94
YBX3-217ENST00000546164 H3BMQ9 156 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 CTDSP2O14595 271 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 RAMP3O60896 148 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 NOL3O60936 208 aaKnown RBP9.2□□□□□ -0.94
YBX3-217ENST00000546164 ACTL6BO94805 426 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 KBTBD11O94819 623 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 OR2A4O95047 310 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 LGALS1P09382 135 aaKnown RBP9.2□□□□□ -0.94
YBX3-217ENST00000546164 TBPP20226 339 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 MRPS10P82664 201 aaKnown RBP9.2□□□□□ -0.94
YBX3-217ENST00000546164 ZNF616Q08AN1 781 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 EGFEM1PQ0D2K5 195 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 TNXAQ16473 311 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 POU2AF1Q16633 256 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 VKORC1L1Q8N0U8 176 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 OR1N2Q8NGR9 330 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 OR52I2Q8NH67 350 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 ISOC1Q96CN7 298 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 OR2A7Q96R45 310 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 ABHD1Q96SE0 405 aa9.2□□□□□ -0.94
YBX3-217ENST00000546164 SPIN2AQ99865 258 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms