RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ELLP55199 621 aaPredicted RBP10.86□□□□□ -0.67
RTN3-214ENST00000545432 CBX3Q13185 183 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 TPBGQ13641 420 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 TTC23Q5W5X9 447 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 IDO2Q6ZQW0 420 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 STPG3Q8N7X2 389 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 OR4A4PQ8NGN8 299 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 OR1L6Q8NGR2 347 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 PYDC1Q8WXC3 89 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 PHYHIPQ92561 330 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 C5orf66Q9H5L9 145 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 C12orf4Q9NQ89 552 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 MRPL27Q9P0M9 148 aaKnown RBP10.86□□□□□ -0.67
RTN3-214ENST00000545432 FBXL7Q9UJT9 491 aa10.86□□□□□ -0.67
RTN3-214ENST00000545432 TRBV6-7A0A0A0MS04 114 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 TSPAN4O14817 238 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 MPPED1O15442 326 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 MYL12AP19105 171 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 ARL3P36405 182 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 CDK10Q15131 360 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 BTNL8Q6UX41 500 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 CEACAM19Q7Z692 300 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 MMD2Q8IY49 270 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 TMEM80Q96HE8 168 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 ADTRPQ96IZ2 230 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 SPAG8Q99932 426 aaPredicted RBP10.85□□□□□ -0.67
RTN3-214ENST00000545432 OR2D2Q9H210 308 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 MAP6D1Q9H9H5 199 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 APLNQ9ULZ1 77 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 SELENOKQ9Y6D0 94 aa10.85□□□□□ -0.67
RTN3-214ENST00000545432 LINC00473A8K010 186 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 CREBL2O60519 120 aaPredicted RBP10.84□□□□□ -0.67
RTN3-214ENST00000545432 IL6RP08887 468 aaPredicted RBP10.84□□□□□ -0.67
RTN3-214ENST00000545432 SAA1P0DJI8 122 aaPredicted RBP10.84□□□□□ -0.67
RTN3-214ENST00000545432 RASSF2P50749 326 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 ODF3L2Q3SX64 289 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 CLEC19AQ6UXS0 136 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 UNQ9165/PRO28630Q6UXU0 137 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 SLC38A6Q8IZM9 456 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 GVQW1Q8N7I0 195 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 SETD9Q8NE22 299 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 GGHQ92820 318 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 MFFQ9GZY8 342 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 C11orf68Q9H3H3 251 aaKnown RBP10.84□□□□□ -0.67
RTN3-214ENST00000545432 KCNK15Q9H427 330 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 SLC2A9Q9NRM0 540 aa10.84□□□□□ -0.67
RTN3-214ENST00000545432 A0A1B0GW64 132 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 EFCAB10A6NFE3 127 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 E7EUB6 86 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 FABP7O15540 132 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 CRYZL1O95825 349 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 CTRB1P17538 263 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 CELP19835 753 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 MED21Q13503 144 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 IRF3Q14653 427 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 C10orf55Q5SWW7 151 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 CTRB2Q6GPI1 263 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 RBPMS2Q6ZRY4 209 aaKnown RBP10.83□□□□□ -0.68
RTN3-214ENST00000545432 ACOT12Q8WYK0 555 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 GALNT14Q96FL9 552 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 FYTTD1Q96QD9 318 aaKnown RBP10.83□□□□□ -0.68
RTN3-214ENST00000545432 CMSS1Q9BQ75 279 aaKnown RBP10.83□□□□□ -0.68
RTN3-214ENST00000545432 C9orf16Q9BUW7 83 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 PECRQ9BY49 303 aa10.83□□□□□ -0.68
RTN3-214ENST00000545432 ZNF320A2RRD8 509 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 HMX3A6NHT5 357 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 CD3GP09693 182 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 ZNF735P0CB33 412 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 NANOS2P60321 138 aaKnown RBP10.82□□□□□ -0.68
RTN3-214ENST00000545432 INSL4Q14641 139 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 ACSM3Q53FZ2 586 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 IGSF11Q5DX21 431 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 PLAC9Q5JTB6 97 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 ZFP1Q6P2D0 407 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 C19orf35Q6ZS72 473 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 C11orf45Q8TAV5 145 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 C2CD4CQ8TF44 421 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 FBLIM1Q8WUP2 373 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 EEF1AKMT3Q96AZ1 226 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 ARHGAP5-AS1Q96IT6 56 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 URM1Q9BTM9 101 aaKnown RBP10.82□□□□□ -0.68
RTN3-214ENST00000545432 KRTAP4-5Q9BYR2 181 aa10.82□□□□□ -0.68
RTN3-214ENST00000545432 ZNF436Q9C0F3 470 aaPredicted RBP10.82□□□□□ -0.68
RTN3-214ENST00000545432 TRBV7-1A0A0A6YYK4 115 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 PNMA8CA0A1B0GUJ8 204 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 ATP5HO75947 161 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 ACTL6BO94805 426 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 IFNA4P05014 189 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 CLEC3BP05452 202 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 CDK1P06493 297 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 RBMS2Q15434 407 aaKnown RBP10.81□□□□□ -0.68
RTN3-214ENST00000545432 ZNF585BQ52M93 769 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 OR6M1Q8NGM8 313 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 OR51E2Q9H255 320 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 KCNK7Q9Y2U2 307 aa10.81□□□□□ -0.68
RTN3-214ENST00000545432 IGLV11-55A0A075B6I3 123 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 S1PR2O95136 353 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 IGHV3-23P01764 117 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 GSTT2P0CG29 244 aa10.8□□□□□ -0.68
RTN3-214ENST00000545432 GSTT2BP0CG30 244 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms