RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PIMREGQ9BSJ6 248 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 RALGAPA1Q6GYQ0 2036 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 HEATR5BQ9P2D3 2071 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 IGHV3OR16-12A0A075B7B8 117 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 CD74P04233 296 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 OR4C13Q8NGP0 309 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 AQP10Q96PS8 301 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 PAM16Q9Y3D7 125 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 METTL26Q96S19 204 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 CLEC7AQ9BXN2 247 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 ZNF729A6NN14 1252 aaPredicted RBP10.89□□□□□ -0.67
CHD4-211ENST00000544484 ZNF708P17019 499 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 IBA57Q5T440 356 aaKnown RBP10.89□□□□□ -0.67
CHD4-211ENST00000544484 EIF4E3Q8N5X7 224 aaKnown RBP10.89□□□□□ -0.67
CHD4-211ENST00000544484 DCTN5Q9BTE1 182 aa10.89□□□□□ -0.67
CHD4-211ENST00000544484 RALYQ9UKM9 306 aaKnown RBP10.89□□□□□ -0.67
CHD4-211ENST00000544484 TMEM189A5PLL7 270 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 PQLC2Q6ZP29 291 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 BPIFA4PQ86YQ2 179 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 COL6A6A6NMZ7 2263 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 ZNF236Q9UL36 1845 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 IGHV3OR16-13A0A075B7E8 117 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 A0A087WV48 116 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 IGHV3-74A0A0B4J1X5 117 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 KBTBD11O94819 623 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 LIPFP07098 398 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 ZNF343Q6P1L6 599 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 FAM216BQ8N7L0 139 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 AP5S1Q9NUS5 200 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 CRXO43186 299 aaPredicted RBP10.88□□□□□ -0.67
CHD4-211ENST00000544484 ARL14EPLP0DKL9 152 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 FXYD3Q14802 87 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 SDHCQ99643 169 aaPredicted RBP10.88□□□□□ -0.67
CHD4-211ENST00000544484 HSPB7Q9UBY9 170 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 WDR25Q64LD2 544 aaPredicted RBP10.88□□□□□ -0.67
CHD4-211ENST00000544484 FADS6Q8N9I5 356 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 FLVCR1-AS1Q8TAF5 88 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 NPIPB3Q92617 1050 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 B9A039 149 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 C12orf77C9JDV5 145 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 ERVH48-1M5A8F1 160 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 CEACAM1P13688 526 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 IGHV1-2P23083 117 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 LINC00114Q6XXX2 140 aa10.88□□□□□ -0.67
CHD4-211ENST00000544484 A0A087X0M5 115 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 A0A1B0GX30 115 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 A8MWL6 223 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 IFNL4K9M1U5 179 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 MFAP4P55083 255 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 PSG7Q13046 419 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 ACP7Q6ZNF0 438 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 OR4B1Q8NGF8 309 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 DNAJC4Q9NNZ3 241 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 DHRS11Q6UWP2 260 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 BET1LQ9NYM9 111 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 BSPH1Q075Z2 132 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 EBLN2Q6P2I7 272 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 S4R3C0 116 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 A0A0G2JK05 382 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 TRGC2P03986 189 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 APOBEC3AP31941 199 aaPredicted RBP10.87□□□□□ -0.67
CHD4-211ENST00000544484 C9orf106Q8NAJ2 232 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 OR10J6PQ8NGY7 276 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 PITPNC1Q9UKF7 332 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 MYOZ3Q8TDC0 251 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 TMEM186Q96B77 213 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 TMEM106BQ9NUM4 274 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 GPR179Q6PRD1 2367 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 FAM90A26D6RGX4 464 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 MOSP00540 346 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 CLDN18P56856 261 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 RND3P61587 244 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 PCSK4Q6UW60 755 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 ZNF383Q8NA42 475 aa10.87□□□□□ -0.67
CHD4-211ENST00000544484 EGR1P18146 543 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 CRYBB3P26998 211 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 POC1AQ8NBT0 407 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 LSM10Q969L4 123 aaKnown RBP10.86□□□□□ -0.67
CHD4-211ENST00000544484 SLC25A33Q9BSK2 321 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 ELOVL5Q9NYP7 299 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 SPTAN1Q13813 2472 aaKnown RBP10.86□□□□□ -0.67
CHD4-211ENST00000544484 KIF26BQ2KJY2 2108 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 RPS11P62280 158 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHD4-211ENST00000544484 IGHV2OR16-5A0A0B4J2B6 119 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 KIR2DL2P43627 348 aaPredicted RBP10.86□□□□□ -0.67
CHD4-211ENST00000544484 PSMB2P49721 201 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 PRB3Q04118 309 aaPredicted RBP10.86□□□□□ -0.67
CHD4-211ENST00000544484 PDCD11Q14690 1871 aaKnown RBP10.86□□□□□ -0.67
CHD4-211ENST00000544484 SCN5AQ14524 2016 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 DOCK6Q96HP0 2047 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 TBX15Q96SF7 602 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 TMEM56-RWDD3S4R434 201 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 C8orf88P0DMB2 117 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 CFHR1Q03591 330 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 OR13A1Q8NGR1 328 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 CCL19Q99731 98 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 SMDT1Q9H4I9 107 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 DEPPQ9NTK1 212 aa10.86□□□□□ -0.67
CHD4-211ENST00000544484 WDR90Q96KV7 1748 aa10.85□□□□□ -0.67
CHD4-211ENST00000544484 UCP3P55916 312 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms