RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RBM38Q9H0Z9 239 aaKnown RBP7.57□□□□□ -1.2
YBX3-212ENST00000542002 GNB4Q9HAV0 340 aa7.57□□□□□ -1.2
YBX3-212ENST00000542002 CCDC59Q9P031 241 aaKnown RBP7.57□□□□□ -1.2
YBX3-212ENST00000542002 SCOCQ9UIL1 159 aa7.57□□□□□ -1.2
YBX3-212ENST00000542002 A0A1W2PN81 502 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 MSGN1A6NI15 193 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 E7EUB6 86 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 I3L521 148 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 M0QYG6 137 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 RGS5O15539 181 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 WIPF1O43516 503 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 RBMXL2O75526 392 aaKnown RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 PGLYRP1O75594 196 aaPredicted RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 PRB2P02812 416 aaPredicted RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 SAA1P0DJI8 122 aaPredicted RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 APELAP0DMC3 54 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 CHRNA7P36544 502 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 TAS2R46P59540 309 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 DGCR2P98153 550 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 MSMO1Q15800 293 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 BEAN1Q3B7T3 259 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 CXorf66Q5JRM2 361 aaPredicted RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 KPRPQ5T749 579 aaPredicted RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 AADACL3Q5VUY0 350 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 UNQ5815/PRO19632Q6UWF5 114 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 TMEM17Q86X19 198 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 ZBTB34Q8NCN2 500 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 OR5T1Q8NG75 326 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 OR4D10Q8NGI6 311 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 OR6F1Q8NGZ6 308 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 OSR1Q8TAX0 266 aaPredicted RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 ABHD5Q8WTS1 349 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 ARPC1AQ92747 370 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 MS4A10Q96PG2 267 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 OR5B12Q96R08 314 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 SOSTQ9BQB4 213 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 TINAGL1Q9GZM7 467 aaPredicted RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 NXF2Q9GZY0 626 aaKnown RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 FXYD6Q9H0Q3 95 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 ALX4Q9H161 411 aaPredicted RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 ZNF430Q9H8G1 570 aaPredicted RBP7.56□□□□□ -1.2
YBX3-212ENST00000542002 MTFP1Q9UDX5 166 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 PRELID3BQ9Y3B1 194 aa7.56□□□□□ -1.2
YBX3-212ENST00000542002 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
YBX3-212ENST00000542002 TRAV3A0A0B4J244 114 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 A0A1B0GW64 132 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 NUDT19A8MXV4 375 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 CCL24O00175 119 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 TPPPO94811 219 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 CNIH1O95406 144 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 CD3DP04234 171 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 IL6RP08887 468 aaPredicted RBP7.55□□□□□ -1.2
YBX3-212ENST00000542002 MYOD1P15172 320 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 TNFSF8P32971 234 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 RCVRNP35243 200 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 MYCNOSP40205 109 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 ACTBL2Q562R1 376 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 C10orf55Q5SWW7 151 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
YBX3-212ENST00000542002 TMEM65Q6PI78 240 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 SPAG16Q8N0X2 631 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 PUSL1Q8N0Z8 303 aaKnown RBP7.55□□□□□ -1.2
YBX3-212ENST00000542002 UBE2E2Q96LR5 201 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 FOXA2Q9Y261 457 aaPredicted RBP7.55□□□□□ -1.2
YBX3-212ENST00000542002 PLXNB1O43157 2135 aa7.55□□□□□ -1.2
YBX3-212ENST00000542002 PF4P02776 101 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 CD33P20138 364 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 KRTAP10-11P60412 298 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 HERV-K104P61576 105 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 TMEM267Q0VDI3 215 aaPredicted RBP7.54□□□□□ -1.2
YBX3-212ENST00000542002 CBX3Q13185 183 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 TNXAQ16473 311 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 VMA21Q3ZAQ7 101 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 ZNF585BQ52M93 769 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 VAX1Q5SQQ9 334 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 SSX9Q7RTT3 188 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 OR51H1Q8NH63 302 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 OR4S2Q8NH73 311 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 C4orf3Q8WVX3 66 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 FCAMRQ8WWV6 532 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 MRGPRFQ96AM1 343 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 DIRAS2Q96HU8 199 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 RHOVQ96L33 236 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 RSRP1Q9BUV0 290 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 C6orf62Q9GZU0 229 aaPredicted RBP7.54□□□□□ -1.2
YBX3-212ENST00000542002 VSIG4Q9Y279 399 aa7.54□□□□□ -1.2
YBX3-212ENST00000542002 NOTCH1P46531 2555 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 CGB1A6NKQ9 187 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 TEX22C9J3V5 150 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 GABARAPH6UMI1 98 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 KBTBD11O94819 623 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 OR2A4O95047 310 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 IGHV3-11P01762 117 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 PRH1P02810 166 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 CD74P04233 296 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 RLN1P04808 185 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 ZNF735P0CB33 412 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 RPA2P15927 270 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 SLC6A1P30531 599 aa7.53□□□□□ -1.2
YBX3-212ENST00000542002 TSPAN5P62079 268 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms