RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ATP6V1FQ16864 119 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 MSMPQ1L6U9 139 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 ZNF718Q3SXZ3 478 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 WDR82Q6UXN9 313 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 OR5R1Q8NH85 324 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 ACTR3CQ9C0K3 210 aaPredicted RBP10.43□□□□□ -0.74
RNF4-222ENST00000541204 FAM215AQ9Y5M1 114 aa10.43□□□□□ -0.74
RNF4-222ENST00000541204 IGHV3-43A0A0B4J1X8 118 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 A0A1B0GV90 55 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 TMEM30CPA0ZSE6 113 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 C1QTNF9BB2RNN3 333 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 HRASP01112 189 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 HBZP02008 142 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 MBP02144 154 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 IGHV3-43DP0DP04 118 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 BMP5P22003 454 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 EIF4EBP1Q13541 118 aaPredicted RBP10.42□□□□□ -0.74
RNF4-222ENST00000541204 EDDM3AQ14507 147 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 JOSD1Q15040 202 aaPredicted RBP10.42□□□□□ -0.74
RNF4-222ENST00000541204 ZNF474Q6S9Z5 364 aaPredicted RBP10.42□□□□□ -0.74
RNF4-222ENST00000541204 DCTN5Q9BTE1 182 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 CXXC4Q9H2H0 198 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 MANBALQ9NQG1 85 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 SH3BGRL2Q9UJC5 107 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 DEFB108AA8MXU0 73 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 PRSS8Q16651 343 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 FIP1L1Q6UN15 594 aaKnown RBP10.42□□□□□ -0.74
RNF4-222ENST00000541204 SSX9Q7RTT3 188 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 REC114Q7Z4M0 266 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 TGIF2LYQ8IUE0 185 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 ZNF709Q8N972 641 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 C1orf162Q8NEQ5 155 aaPredicted RBP10.42□□□□□ -0.74
RNF4-222ENST00000541204 TMEM37Q8WXS4 190 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 FUT9Q9Y231 359 aa10.42□□□□□ -0.74
RNF4-222ENST00000541204 TMEM210A6NLX4 147 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 DVL1O14640 695 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 NPPCP23582 126 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 CATR1Q13166 79 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 SPRNQ5BIV9 151 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 H2BFWTQ7Z2G1 175 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 RBMXL3Q8N7X1 1067 aaKnown RBP10.41□□□□□ -0.74
RNF4-222ENST00000541204 ZBTB34Q8NCN2 500 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 NINJ1Q92982 152 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 LINC00473A8K010 186 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 KALRNO60229 2985 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 EGR1P18146 543 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 SSTR5P35346 364 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 FAM3BP58499 235 aaPredicted RBP10.41□□□□□ -0.74
RNF4-222ENST00000541204 IGF2-ASQ6U949 168 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 ACP7Q6ZNF0 438 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 RNASEH2CQ8TDP1 164 aaKnown RBP10.41□□□□□ -0.74
RNF4-222ENST00000541204 LRRC29Q8WV35 223 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 AURKAIP1Q9NWT8 199 aaPredicted RBP10.41□□□□□ -0.74
RNF4-222ENST00000541204 SLC25A15Q9Y619 301 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 CUL9Q8IWT3 2517 aa10.41□□□□□ -0.74
RNF4-222ENST00000541204 ROS1P08922 2347 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 IGHV3OR15-7A0A075B7D8 119 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 MBD3L4A6NDZ8 208 aaPredicted RBP10.4□□□□□ -0.74
RNF4-222ENST00000541204 MBD3L3A6NE82 208 aaPredicted RBP10.4□□□□□ -0.74
RNF4-222ENST00000541204 OOEPA6NGQ2 149 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 MBD3L5A6NJ08 208 aaPredicted RBP10.4□□□□□ -0.74
RNF4-222ENST00000541204 C11orf94C9JXX5 98 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 IGLV1-44P01699 117 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 IGHV3-13P01766 116 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 IGHV3-7P01780 117 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 CRYAAP02489 173 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 NUBP1P53384 320 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 GCSAMLQ5JQS6 135 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 MBD3L2Q8NHZ7 208 aaPredicted RBP10.4□□□□□ -0.74
RNF4-222ENST00000541204 ANAPC16Q96DE5 110 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 NEIL1Q96FI4 390 aaPredicted RBP10.4□□□□□ -0.74
RNF4-222ENST00000541204 COQ2Q96H96 371 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 CLDN14O95500 239 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 CHRNA7P36544 502 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 C22orf34Q6ZV56 151 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 OR2T10Q8NGZ9 312 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 TMEM170AQ8WVE7 144 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 MRPL37Q9BZE1 423 aaKnown RBP10.4□□□□□ -0.74
RNF4-222ENST00000541204 HES4Q9HCC6 221 aa10.4□□□□□ -0.74
RNF4-222ENST00000541204 TRAV38-1A0A0B4J264 116 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 ZNF705GA8MUZ8 300 aaPredicted RBP10.39□□□□□ -0.75
RNF4-222ENST00000541204 RAB29O14966 203 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 SPRY3O43610 288 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 RNF224P0DH78 156 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 CDC34P49427 236 aaPredicted RBP10.39□□□□□ -0.75
RNF4-222ENST00000541204 UBE2G2P60604 165 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 FAM27E3Q08E93 113 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
RNF4-222ENST00000541204 Q6ZS92 163 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 ZNF664Q8N3J9 261 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 BSNQ9UPA5 3926 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 ST8SIA5O15466 376 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 IFNA10P01566 189 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 GNB2P62879 340 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 VWC2Q2TAL6 325 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 Q3ZCU0 254 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 ACTL10Q5JWF8 245 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 SLC35E4Q6ICL7 350 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 OR13A1Q8NGR1 328 aa10.39□□□□□ -0.75
RNF4-222ENST00000541204 CIB3Q96Q77 187 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms