RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 BMPR1BO00238 502 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 CREBL2O60519 120 aaPredicted RBP10.72□□□□□ -0.69
SNHG1-213ENST00000540725 ACTL6BO94805 426 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 PRH1P02810 166 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 SAA1P0DJI8 122 aaPredicted RBP10.72□□□□□ -0.69
SNHG1-213ENST00000540725 ZNF45Q02386 682 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 CDK10Q15131 360 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 FAM223AQ8IWN6 122 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 SPIN2AQ99865 258 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 SPIN2BQ9BPZ2 258 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 ATG5Q9H1Y0 275 aa10.72□□□□□ -0.69
SNHG1-213ENST00000540725 ELF5Q9UKW6 265 aaPredicted RBP10.72□□□□□ -0.69
SNHG1-213ENST00000540725 EPPK1P58107 5090 aaKnown RBP10.71□□□□□ -0.69
SNHG1-213ENST00000540725 TRBV9A0A0B4J1U6 114 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 TRDV1A0A1B0GX56 115 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 FCGR3BO75015 233 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 TUSC2O75896 110 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 IFNA6P05013 189 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 DTYMKP23919 212 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 MECP2P51608 486 aaKnown RBP10.71□□□□□ -0.69
SNHG1-213ENST00000540725 ATP5G2Q06055 141 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 ARL6IP1Q15041 203 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 C10orf55Q5SWW7 151 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 KCTD9Q7L273 389 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 MMD2Q8IY49 270 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 ZNF645Q8N7E2 425 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 OR2K2Q8NGT1 345 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 DCUN1D5Q9BTE7 237 aa10.71□□□□□ -0.69
SNHG1-213ENST00000540725 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.7□□□□□ -0.7
SNHG1-213ENST00000540725 AIREO43918 545 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 CDNFQ49AH0 187 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 OR2B11Q5JQS5 317 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 C22orf42Q6IC83 251 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 ADAMTSL5Q6ZMM2 481 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 NR2C2APQ86WQ0 139 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 TTC9CQ8N5M4 171 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 NECAP1Q8NC96 275 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 PLEKHA3Q9HB20 300 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 BLOC1S6Q9UL45 172 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 PRELID3BQ9Y3B1 194 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 OR2W1Q9Y3N9 320 aa10.7□□□□□ -0.7
SNHG1-213ENST00000540725 SMIM30A4D0T7 59 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 HLA-DQB1P01920 261 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 CTXN2P0C2S0 81 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 CD36P16671 472 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 NFYAP23511 347 aaPredicted RBP10.69□□□□□ -0.7
SNHG1-213ENST00000540725 CD81P60033 236 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 RPL30P62888 115 aaKnown RBP10.69□□□□□ -0.7
SNHG1-213ENST00000540725 CD300EQ496F6 205 aaPredicted RBP10.69□□□□□ -0.7
SNHG1-213ENST00000540725 SLC25A42Q86VD7 318 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 CNBD2Q96M20 576 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 ST6GALNAC5Q9BVH7 336 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 RETNQ9HD89 108 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 MRPS7Q9Y2R9 242 aaKnown RBP10.69□□□□□ -0.7
SNHG1-213ENST00000540725 RBMX2Q9Y388 322 aaKnown RBP10.69□□□□□ -0.7
SNHG1-213ENST00000540725 CEPT1Q9Y6K0 416 aa10.69□□□□□ -0.7
SNHG1-213ENST00000540725 IGKV1D-13A0A0B4J2D9 117 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 HMX3A6NHT5 357 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 OR2J3O76001 311 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 SLC22A5O76082 557 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 TPPPO94811 219 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 IGKV1-13P0DP09 117 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 GALP22466 123 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 C15orf32Q32M92 178 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 HACD4Q5VWC8 232 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 IZUMO2Q6UXV1 221 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 LINC00322Q6ZN03 302 aaPredicted RBP10.68□□□□□ -0.7
SNHG1-213ENST00000540725 LAX1Q8IWV1 398 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 VKORC1L1Q8N0U8 176 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 DYNLRB2Q8TF09 96 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 NUDCD2Q8WVJ2 157 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 NEURL2Q9BR09 285 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 OR51E2Q9H255 320 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 DCSTAMPQ9H295 470 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 VCX3BQ9H321 246 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 ZNF257Q9Y2Q1 563 aa10.68□□□□□ -0.7
SNHG1-213ENST00000540725 TMEM235A6NFC5 223 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 ZNF785A8K8V0 405 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 TEX22C9J3V5 150 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 PPP5D1E7EU14 171 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 IGLV2-14P01704 120 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 HSPA13P48723 471 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 FAM209BQ5JX69 171 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 CNIH2Q6PI25 160 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 C19orf35Q6ZS72 473 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 OR4S2Q8NH73 311 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 TCTEX1D2Q8WW35 142 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 KCTD12Q96CX2 325 aaKnown RBP10.67□□□□□ -0.7
SNHG1-213ENST00000540725 HIPK2Q9H2X6 1198 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 SLC2A8Q9NY64 477 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 PLECQ15149 4684 aaKnown RBP10.67□□□□□ -0.7
SNHG1-213ENST00000540725 BIRC6Q9NR09 4857 aa10.67□□□□□ -0.7
SNHG1-213ENST00000540725 C2orf70A6NJV1 201 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 NOTOA8MTQ0 251 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 KBTBD11O94819 623 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 HLA-AP01891 365 aaKnown RBP10.66□□□□□ -0.7
SNHG1-213ENST00000540725 IL6RP08887 468 aaPredicted RBP10.66□□□□□ -0.7
SNHG1-213ENST00000540725 CD7P09564 240 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 EDN2P20800 178 aa10.66□□□□□ -0.7
SNHG1-213ENST00000540725 RPL27AP46776 148 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms