RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 H1FOOQ8IZA3 346 aaPredicted RBP9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 NECAP1Q8NC96 275 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 DYNLRB2Q8TF09 96 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 ACOT12Q8WYK0 555 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 ZNF430Q9H8G1 570 aaPredicted RBP9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 RETNQ9HD89 108 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 ACOT13Q9NPJ3 140 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 ZC4H2Q9NQZ6 224 aa9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 TECRQ9NZ01 308 aaKnown RBP9.07□□□□□ -0.96
CBX3P4-202ENST00000540428 LINC00473A8K010 186 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 LGALS9O00182 355 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 RAB27BO00194 218 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 PDCD5O14737 125 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 CD7P09564 240 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 SAA1P0DJI8 122 aaPredicted RBP9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 GNB3P16520 340 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 RAB6AP20340 208 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 KIR2DS2P43631 304 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 PLA2G7Q13093 441 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 ARL6IP1Q15041 203 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 SSX1Q16384 188 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 HES5Q5TA89 166 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 DEFB125Q8N687 156 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 ZNF257Q9Y2Q1 563 aa9.06□□□□□ -0.96
CBX3P4-202ENST00000540428 TRAV1-2A0A0B4J238 106 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 RBMY1BA6NDE4 496 aaKnown RBP9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 METTL21EPA6NDL7 271 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 RBMY1EA6NEQ0 496 aaKnown RBP9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 C2orf70A6NJV1 201 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 OR11H12B2RN74 326 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 RGS10O43665 173 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 GGCTO75223 188 aaKnown RBP9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 SLC22A5O76082 557 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 PRH1P02810 166 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 RBMY1DP0C7P1 496 aaKnown RBP9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 FOLR2P14207 255 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 TALDO1P37837 337 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 MAP2K4P45985 399 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 ARFRP1Q13795 201 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 C15orf32Q32M92 178 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 ZNF645Q8N7E2 425 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 MAFIPQ8WZ33 124 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 MGLLQ99685 303 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 FAM110AQ9BQ89 295 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 SRD5A3Q9H8P0 318 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 PRELID3BQ9Y3B1 194 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 DMRT1Q9Y5R6 373 aa9.05□□□□□ -0.96
CBX3P4-202ENST00000540428 IFITM5A6NNB3 132 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 FCGR3BO75015 233 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 CTXN2P0C2S0 81 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 CD36P16671 472 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 DTYMKP23919 212 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 SLC16A13Q7RTY0 426 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 PRSS48Q7RTY5 328 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 GPHB5Q86YW7 130 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 VSTM2AQ8TAG5 236 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 OR51E2Q9H255 320 aa9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 MRPS7Q9Y2R9 242 aaKnown RBP9.04□□□□□ -0.96
CBX3P4-202ENST00000540428 HYDINQ4G0P3 5121 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 A0A075B6Q4 140 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 IGKV1D-8A0A087WSZ0 117 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 NPIPB5A8MRT5 1133 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 OR2J3O76001 311 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 HLA-DQB1P01920 261 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 MAS1LP35410 378 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 GUCA2BQ16661 112 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 KLK9Q2XQG4 91 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 C10orf55Q5SWW7 151 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 KCTD9Q7L273 389 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 DCUN1D5Q9BTE7 237 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 CCDC90BQ9GZT6 254 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 KLK9Q9UKQ9 250 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 RBMX2Q9Y388 322 aaKnown RBP9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 OR2W1Q9Y3N9 320 aa9.03□□□□□ -0.96
CBX3P4-202ENST00000540428 HMX3A6NHT5 357 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 A8MWP6 167 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 TEX22C9J3V5 150 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 PPP5D1E7EU14 171 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 KBTBD11O94819 623 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 OR2C1O95371 312 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 CRYGCP07315 174 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 CBLN1P23435 193 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 CRHBPP24387 322 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 MYL9P24844 172 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 RPL27AP46776 148 aaKnown RBP9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 OR10A3P58181 314 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 OR4S2Q8NH73 311 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 TMEM167AQ8TBQ9 72 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 WDR89Q96FK6 387 aaPredicted RBP9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 OR2A7Q96R45 310 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 WFDC10AQ9H1F0 79 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 DCSTAMPQ9H295 470 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 SLC2A9Q9NRM0 540 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 FBXL7Q9UJT9 491 aa9.02□□□□□ -0.97
CBX3P4-202ENST00000540428 DPPA5A6NC42 116 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 DHFRP00374 187 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 IGLV2-14P01704 120 aa9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 HLA-AP01891 365 aaKnown RBP9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 IL6RP08887 468 aaPredicted RBP9.01□□□□□ -0.97
CBX3P4-202ENST00000540428 ZNF735P0CB33 412 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms