RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 GPHA2Q96T91 129 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 SFXN3Q9BWM7 321 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 LHFPL6Q9Y693 200 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 KIAA1549Q9HCM3 1950 aa8□□□□□ -1.13
CTNNA1-243ENST00000540387 IGLV3-12A0A075B6K2 115 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 IGKV1D-43A0A0B4J1Z2 117 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 GFRA3O60609 400 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 NDUFB4O95168 129 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 VDAC1P21796 283 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 TIMP3P35625 211 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 RAC3P60763 192 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 ACSM6Q6P461 480 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 GTF2H5Q6ZYL4 71 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 SPSB1Q96BD6 273 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 DGAT2Q96PD7 388 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 FNDC4Q9H6D8 234 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 IL36BQ9NZH7 164 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 THYN1Q9P016 225 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 IGKV3D-11A0A0A0MRZ8 115 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 FAM231BA6NCW3 169 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 GUCA1AP43080 201 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 CA7P43166 264 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 LGALS4P56470 323 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 OR8B12Q8NGG6 310 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 TAF15Q92804 592 aaKnown RBP eCLIP7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 POM121L2Q96KW2 1035 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 OR4C12Q96R67 309 aa7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 ERRFI1Q9UJM3 462 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-243ENST00000540387 TRAV36DV7A0A075B6V5 113 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 SLC17A3O00476 420 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 PRKNO60260 465 aaPredicted RBP7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 EIF3IQ13347 325 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 RNFT1Q5M7Z0 435 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 FNDC7Q5VTL7 733 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 MRPL14Q6P1L8 145 aaKnown RBP7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 RAB40CQ96S21 281 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 GNB1LQ9BYB4 327 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 MOB1AQ9H8S9 216 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 NAT8BQ9UHF3 227 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 DCHS1Q96JQ0 3298 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 ASPMQ8IZT6 3477 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 TRBV20OR9-2A0A075B6H5 130 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 TRBV9A0A0B4J1U6 114 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 IGHV3-20A0A0C4DH32 117 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 UBE2L5PA0A1B0GUS4 154 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 C7orf71A4D174 169 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 SLC22A20A6NK97 555 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 DEGS1O15121 323 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 PPYP01298 95 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 IFI6P09912 130 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 OR10J4P0C629 311 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 LINC00869P0C866 280 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 HLA-DOBP13765 273 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 OR2Z1Q8NG97 314 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 NINJ1Q92982 152 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 Q96M66 194 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 SPRY4Q9C004 299 aa7.98□□□□□ -1.13
CTNNA1-243ENST00000540387 WISP1O95388 367 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 CGAP01215 116 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 SMIM17P0DL12 118 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 FCGR2AP12318 317 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 NPY1RP25929 384 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 PLP1P60201 277 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 TBR1Q16650 682 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 C5orf64Q2M2E5 130 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 TMEM164Q5U3C3 297 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 EBLN2Q6P2I7 272 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 APOBEC3DQ96AK3 386 aaPredicted RBP7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 OR2V2Q96R30 315 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 A0A0G2JRQ6 117 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 PDE6DO43924 150 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 DXOO77932 396 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 IGHMP01871 453 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 SERPINE2P07093 398 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 IAPPP10997 89 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 SRIP30626 198 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 SSTR5P35346 364 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 ATP5G3P48201 142 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 RPS18P62269 152 aaKnown RBP7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 HBG1P69891 147 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 HBG2P69892 147 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 PMP22Q01453 160 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 OR10G9Q8NGN4 311 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 OR10G7Q8NGN6 311 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 OR4A5Q8NH83 315 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 OR2AE1Q8NHA4 323 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 ZNF479Q96JC4 524 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 ST20Q9HBF5 79 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 DLL3Q9NYJ7 618 aa7.97□□□□□ -1.13
CTNNA1-243ENST00000540387 KLF7O75840 302 aaPredicted RBP7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 OTX2P32243 289 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 ZNF121P58317 390 aaPredicted RBP7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 HTD2P86397 168 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 FUT7Q11130 342 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 PLCXD3Q63HM9 321 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 SLC25A34Q6PIV7 304 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 SHISA2Q6UWI4 295 aa7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 C6orf15Q6UXA7 325 aaPredicted RBP7.96□□□□□ -1.13
CTNNA1-243ENST00000540387 ZNF841Q6ZN19 808 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms