RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 LIPT2A6NK58 231 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 TMEM238C9JI98 176 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 IGKV3-11P04433 115 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 SNAI3Q3KNW1 292 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 Q6ZVH6 145 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 MEGF9Q9H1U4 602 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 NGBQ9NPG2 151 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 CCL28Q9NRJ3 127 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 CLCF1Q9UBD9 225 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 PXMP4Q9Y6I8 212 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 DSPP15924 2871 aaKnown RBP7.38□□□□□ -1.23
DDB1-217ENST00000540166 OR7C2O60412 319 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 RPEL1Q2QD12 228 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 PIGYQ3MUY2 71 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 WDR73Q6P4I2 378 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 OR1K1Q8NGR3 316 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 SFRP2Q96HF1 295 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 IMMP1LQ96LU5 166 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 SIGLEC12Q96PQ1 595 aa7.38□□□□□ -1.23
DDB1-217ENST00000540166 IGHV3-15A0A0B4J1V0 119 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 RPS16P62249 146 aaKnown RBP7.37□□□□□ -1.23
DDB1-217ENST00000540166 PRSS8Q16651 343 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 KIAA1644Q3SXP7 199 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 OR2M7Q8NG81 312 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 Q96M66 194 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 OXGR1Q96P68 337 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 AGMATQ9BSE5 352 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 ZNF319Q9P2F9 582 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 LHFPL6Q9Y693 200 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 GAGE10A6NGK3 116 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 VSTM5A8MXK1 200 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 H0Y8G0 127 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 TYMSP04818 313 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 SLC25A6P12236 298 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 MAGEA5P43359 124 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 OR52L2PQ8NGH6 319 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 OR2AE1Q8NHA4 323 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 GMPPAQ96IJ6 420 aaPredicted RBP7.37□□□□□ -1.23
DDB1-217ENST00000540166 SHANK1Q9Y566 2161 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 CEACAM4O75871 244 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 TPTE2P1Q5T6R2 138 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 LHFPL2Q6ZUX7 228 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 OR5B3Q8NH48 314 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 TM2D1Q9BX74 207 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 HIPK2Q9H2X6 1198 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 PPP1R3CQ9UQK1 317 aa7.37□□□□□ -1.23
DDB1-217ENST00000540166 LOC102723996A0A087X1L8 192 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 IGKV1-9A0A0C4DH69 117 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 K7EP13 123 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 M0R2Z0 102 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 HYPMO75409 117 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 TUSC2O75896 110 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 CA7P43166 264 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 ID3Q02535 119 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 ZP4Q12836 540 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 IZUMO4Q1ZYL8 232 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 PLEKHA3Q9HB20 300 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 PCNX3Q9H6A9 2034 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 E9PLN8 166 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 PSG1P11464 419 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 TSPOP30536 169 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 OR10G3Q8NGC4 313 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 VKORC1Q9BQB6 163 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 IGHV2OR16-5A0A0B4J2B6 119 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 NUPR1O60356 82 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 SRSF10O75494 262 aaKnown RBP7.36□□□□□ -1.23
DDB1-217ENST00000540166 S1PR2O95136 353 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 CLPSP04118 112 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 IGLC2P0DOY2 106 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 IGLC3P0DOY3 106 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 USF1P22415 310 aaPredicted RBP7.36□□□□□ -1.23
DDB1-217ENST00000540166 TGFBR3Q03167 851 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 LRRC75BQ2VPJ9 315 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 HIST2H2BCQ6DN03 193 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 RNASEKQ6P5S7 137 aaKnown RBP7.36□□□□□ -1.23
DDB1-217ENST00000540166 C12orf54Q6X4T0 127 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 GPR146Q96CH1 333 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 TMEM147Q9BVK8 224 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 TTTY12Q9BZ98 90 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 CSTL1Q9H114 145 aa7.36□□□□□ -1.23
DDB1-217ENST00000540166 CHTOPQ9Y3Y2 248 aaKnown RBP7.36□□□□□ -1.23
DDB1-217ENST00000540166 PRSS47A8MTI9 375 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 NUDT3O95989 172 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 IGHMP01871 453 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 BMI1P35226 326 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 TCL1AP56279 114 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 RPL24P83731 157 aaKnown RBP7.35□□□□□ -1.23
DDB1-217ENST00000540166 TIGITQ495A1 244 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 PET117Q6UWS5 81 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 MKXQ8IYA7 352 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 FAM57AQ8TBR7 257 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 CYYR1Q96J86 154 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 ZNF703Q9H7S9 590 aaPredicted RBP7.35□□□□□ -1.23
DDB1-217ENST00000540166 H3BMH7 237 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 SIRPB1O00241 398 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 SUMO3P55854 103 aaPredicted RBP7.35□□□□□ -1.23
DDB1-217ENST00000540166 EDDM3BP56851 147 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 SLC35B1P78383 322 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 OR8B8Q15620 311 aa7.35□□□□□ -1.23
DDB1-217ENST00000540166 WIPI1Q5MNZ9 446 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms